Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00680 ATGTATATTGGTTTTTCTGGTTCAACTGAGGGAAGTACAGAGCTTCATCTGATTGCAGATTGGAGTTTTAACACTTCTGGGTTTGTTCCTATTAGACCAAGATTAACGCCTCATAACATTTCTGATAGTTCTGTGAGTGTAACTCCTAACATTCCTATCTCTGAATCCACCACTAATAAGTATCATAATAGGCTTGGATTGGGACTTGGGATTTCTGGCCCTGCATTTTTTTGCATTGTTCTTGTTGTTTTTGGTTATATTTCTTTAAGAAAATTGAAGAAAATTAGGACCCAGAAGAGCTTCAAAGCAGAGCTTTCAACAGGCCCAAGGGAATTTAATTACAAAGAGCTGAAAGAAGCAACAAAGGGTTTTCACTCTAGTAGGATCATTGGTAATGGAGCTTTTGGAACTGTTTATAAAGCTTTTTTTGCCTCGTCGGGGTCGATAGCTGCCGTTAAACGGTCGAAACATTCTCACGAAGGGAAAACAGAATTCCTTGTCGAATTGTCGATCATTGCTCGTTTAAGGCACAAGAATTTAGTTCAGCTTCAAGGTTGGTGTGTTGAGAAGGGCGAACTGCTCCTTGTTTATGATTTTATGCCTAATGGCAGTCTTGATAGATTGCTTTACCAAGAAGTTGGAGAAGCTTGTTTATTGAAATGGCCTCATAGATACAATATTGCAGCTGGGTTGGCATCTGTTTTGACATATCTTCATCAAGAATGTGAACAGCAAGTGATTCACAGAGATATAAAGACTGGCAATGTATTGCTTGATGGGAATTTCAATGCAAGGTTGGGCGATTTCGGGTTGGCGAAGCTCATGGATCACGACAAGAGTCCCGTCTCGACGCTAACTGCAGGAACGATGGGATATCTCGCACCCGAGTATCTTCAATACGGAAAAGCCACCGAAAAAACTGACGTTTTCAGCTACGGGGTGGTTATTCTAGAAGTGGCTTGCGGGAGGAGGCCGATTGAGAGAGAAACAGTGGCTAATAAAATGGTGAACTTGGTTGATTGGGTGTGGGGATTGCATTCTCAGGGGAAGATAATTGAAGCTGCTGATAAAAGACTGAAAGGAGAGTTCATTGAAGAGGAGATGAAGAAGCTTTTACTGGTGGGTTTGAGTTGTTCAAACCCAGATAGTGCTGAAAGGCCTTCCATGAGAAGAGTTCTGCAAATTCTTCATAATGAGGCAGAGGCTTTGTCTGTGCCTAAGATGAAACCCAGTCTTACATTTTCTCTGGGTTTACCTCTGACGATTGATGACATCGTTTCAGATGAAGGTGAATAG 1296 41.59 MYIGFSGSTEGSTELHLIADWSFNTSGFVPIRPRLTPHNISDSSVSVTPNIPISESTTNKYHNRLGLGLGISGPAFFCIVLVVFGYISLRKLKKIRTQKSFKAELSTGPREFNYKELKEATKGFHSSRIIGNGAFGTVYKAFFASSGSIAAVKRSKHSHEGKTEFLVELSIIARLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDRLLYQEVGEACLLKWPHRYNIAAGLASVLTYLHQECEQQVIHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVACGRRPIERETVANKMVNLVDWVWGLHSQGKIIEAADKRLKGEFIEEEMKKLLLVGLSCSNPDSAERPSMRRVLQILHNEAEALSVPKMKPSLTFSLGLPLTIDDIVSDEGE 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 55115442 55116737 - Bda021814.1 Bda05g00680 6992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00680 431 SUPERFAMILY Protein kinase-like (PK-like) 107 414 IPR011009 -
Bda05g00680 431 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Bda05g00680 431 SUPERFAMILY Concanavalin A-like lectins/glucanases 1 143 IPR013320 -
Bda05g00680 431 ProSiteProfiles Protein kinase domain profile. 124 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00680 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Bda05g00680 431 PANTHER - 1 415 - -
Bda05g00680 431 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 1 415 - -
Bda05g00680 431 Pfam Protein kinase domain 124 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00680 431 Gene3D Transferase(Phosphotransferase) domain 1 200 416 - -
Bda05g00680 431 SMART serkin_6 124 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00680 431 CDD STKc_IRAK 130 396 - -
Bda05g00680 431 Gene3D Phosphorylase Kinase; domain 1 86 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00680 Bda-Chr5:55115442 Bda05g01237 Bda-Chr5:60284897 2.17E-150 dispersed
Bda08g00033 Bda-Chr8:284642 Bda05g00680 Bda-Chr5:55115442 5.66E-56 dispersed
Bda12g00968 Bda-Chr12:40858567 Bda05g00680 Bda-Chr5:55115442 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69633 PF00069 Pkinase 5.50E-51 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00680 - - mcha:111013835 730.324