Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00688 ATGTGGGGTCCGCCTAACGCCATGATTGAGGGTGTATCAGCTGCTAGTAACCAAGGGATTGTTCCTCGCATTTTCAAAATGCTATTTTCGGAGATTCAAAAAGAACATGAAAACTCTGAAACAAAACCGATAAATTATCAGTGTCGATGTTCTTTTCTCGAGGTTTACAATGAGCAAATTAATGATCTTCTTGATCCAACTCAGAAGAACCTTGAGGATGATGCGAAAAGTGGATTGTACTCTGAGAACTTATCTGAAGAATATTTGACAAGCTATGATGATGTGATACAGATTCTTATTAAGGGACTTTCAAGTAGAAAAGCAGGGGCAACCACAGTAAATTCTAAGAGTTCCAGGTCTCATATTGTGTTTAATTTCATCATCGAATCATGGCGCAAGGAAAATTCTTCAAGTTTTGGTAGCTCAAAAACAAGCCGAATCAGCTTCATTGATCTTGCAGGCCTGGATAGAAACCTAAATGATGATGTGGATAGACAGTGTATGAGGGAAGCCAAGAATTTGAAAAAGTTTCTATCACCACTCGGGCACATGGTGAACTCATTTTCAAATGAAGCTCATCCTGGCAAAGCTGAAGATGTTTTGCATACAAATTCTTGTTTGACGCATCTACTGCGAGACTCACTTGGTGGCAACGCTAAGCTCACAGTTATCTGTGTCATTTCTCAAGATAACAACTACATTGTAGAAACACTGAAGACTTTAAGATTTGGACAACGATTAAAATGCGTAAAGAATAAACCTGTAATAAATAAAATAACAGAAGATGGTGTGAATGATCTGAGTGATCAAATTCGTCAATTGAAGGAAGAACTTATAAGAGCCAAGTCACCTGCATGCAGCAGTTCAATGGAAAGTGTAAATGGATATTTTCAAGGCCAAAATGTAAGAGAAAGCTTGAATCAGTTAAGACATGGCCTTAACCGCTCACTTATTCTTCCAAAGATGGACAATGAGTCTGATAATTACGTTAATTTGGATGAGCAAGACATTAAGGAATTACGTCAACAGCTAGACAAGTTGAATAGTTCTAGTGAATCAATTGAGACAAGTCTACCTTCCAGAAGAGATTCCCTTAACTTTTCATCAGCTGGAGAAAGTTTTGAAACGGATTCAATGAGTGATGGTGATGTAAATAGTCCAGAGGATGAAACTGAAGTCGTAGATATGAATTTAGACAAACCTCAGAATGACAAAATTGAGTCACTACATTGCGTTGCTATCCATCTCACCTCGAAGGCTATTGAGACTATGATCAGAAGAAGCCTTTCAATCAATTCGAGCTGTCGGTCCCCTATTCTGGATGACCCCCCATTATCAGAATCTCCAAAAATTGGAAAATCTCAGAGGAAGAGCATGGCTATATCATCGAGTTCGTCACTTTGTAACGATAATAAGTCAGAGAATTCCAAGTTCAAAAACATAGAATCAACGGAGTTGCCATGTCAGAGTAAATGTGAATCCACATTGCAGAGAAGTAAGGTACTTCAAGGTCCAACTGAATCATTGGCTGCTAGTCTACAAAGAGGCTTGAATGTCATTGACTATCACCAGAGAAATTCGGCATCAATCAAATCTTCAGTGTCCTTCTCCTTTGAGCATCTAGCACTGAAAACTATCCCAGCAGCCCCAAAAGCAGATTCATTGACTATTAAAGAAGTGAACAATGGACCATCCTCTTACCTCTGTGCATCTTGCCAACAAAAACTACACAGAAATCAAATAAATGACGTTCACAATAACTCGAAACTACCTTTGGCGGTGGTTAATGAAACTGCAGATTTCATCCAACTCAATCACTTAAATGAGCTCGAAAAATTCACACCCGATATACATATGAACGAAGACAGTCAAGAAAGTGACAGTCCTGAGCCATCGGGTGAAAAACTTTTATCACTTGAGAATGCCAAAAGCAATAACTATCCATACGACGAGAAGCTTCAAAGGTGCAATCTTGTAGAGTTCCATCAAAATGGATTCTCAAATGTGAATGAGAAGGAAGCACTTTCAAAGGAATTTCAAAGCTTGAATGGGATGCCCGTTCAAAAGTCCTCTGACAAATTAAGAACCTCATTGTTGGCACGGTCCATTCAGCTAAGAAAAGGTGGACTGGATTTCAAACAAATCAGTGAGGAGGAACTGGAGAAAGAAAGACAGAGATGGATGGAAATGGAGAGCGAATGGATATCTTTAACCGACGAATTGAGAATCGATCTTGAAGCGAGTCGGCGACATGCGGAGAAGGTGGAGATGGAGTTGAGGTTGGAGAAAATGTGCAAAGAGGAGTTGGATGATGCAATTCAGAGAGCTGTTCTTGGCCACGCCAGAATTATCGAGCATTACTCCGAGTTACAAGAAAACTACAATGAATTGGTCGGAAAGCATTGGGTTGTAATGGAAGGTATAGCAGAATTTAAAAGAGCAGCAGAAAAGGCCGGATCTAAAGGTCACGGATCTCAGTTTGCTAAATGCCTTACGGCAGAGCTTTCGGCAGCGAGAAGAGAGAGGGAGAGGGAGAGAGAATTCCTGAAAAAGGAGAACACGAGCCTGAGAATTCAACTCAGAGACACCGCAGAAGCCGTTCAGGCCGCCGGAGAACTCCTTGCAAGGCTAAGAGAAGCAGAGCAATCAGCTTCAGTTGCAGAGGAAAACTCAACGAGGGCCGAACAAGAAAACGAGAATTTGAAGAAGCAAATGGAGAAACTGAAAGAGAAACACAAGGCCGAGATGGAGACGATGAAACAGTATCTCGCAGATAGCAGATTGCCTTCATCTGCGTTGAAGCCACTGTACAGAGAAGAATCAGAAATAGTAAGTGAAGCAGTGGATGAAGATCAGGCATGGAGAGCAGAGTTTGGAACTATATATCAAGCTCATTACTGA 2901 40.71 MWGPPNAMIEGVSAASNQGIVPRIFKMLFSEIQKEHENSETKPINYQCRCSFLEVYNEQINDLLDPTQKNLEDDAKSGLYSENLSEEYLTSYDDVIQILIKGLSSRKAGATTVNSKSSRSHIVFNFIIESWRKENSSSFGSSKTSRISFIDLAGLDRNLNDDVDRQCMREAKNLKKFLSPLGHMVNSFSNEAHPGKAEDVLHTNSCLTHLLRDSLGGNAKLTVICVISQDNNYIVETLKTLRFGQRLKCVKNKPVINKITEDGVNDLSDQIRQLKEELIRAKSPACSSSMESVNGYFQGQNVRESLNQLRHGLNRSLILPKMDNESDNYVNLDEQDIKELRQQLDKLNSSSESIETSLPSRRDSLNFSSAGESFETDSMSDGDVNSPEDETEVVDMNLDKPQNDKIESLHCVAIHLTSKAIETMIRRSLSINSSCRSPILDDPPLSESPKIGKSQRKSMAISSSSSLCNDNKSENSKFKNIESTELPCQSKCESTLQRSKVLQGPTESLAASLQRGLNVIDYHQRNSASIKSSVSFSFEHLALKTIPAAPKADSLTIKEVNNGPSSYLCASCQQKLHRNQINDVHNNSKLPLAVVNETADFIQLNHLNELEKFTPDIHMNEDSQESDSPEPSGEKLLSLENAKSNNYPYDEKLQRCNLVEFHQNGFSNVNEKEALSKEFQSLNGMPVQKSSDKLRTSLLARSIQLRKGGLDFKQISEEELEKERQRWMEMESEWISLTDELRIDLEASRRHAEKVEMELRLEKMCKEELDDAIQRAVLGHARIIEHYSELQENYNELVGKHWVVMEGIAEFKRAAEKAGSKGHGSQFAKCLTAELSAARREREREREFLKKENTSLRIQLRDTAEAVQAAGELLARLREAEQSASVAEENSTRAEQENENLKKQMEKLKEKHKAEMETMKQYLADSRLPSSALKPLYREESEIVSEAVDEDQAWRAEFGTIYQAHY 966
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 55183225 55199592 + Bda021823.1 Bda05g00688 7000

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00688 966 Coils Coil 330 357 - -
Bda05g00688 966 Coils Coil 713 733 - -
Bda05g00688 966 PANTHER CENTROMERE PROTEIN E 615 966 - -
Bda05g00688 966 PANTHER CENTROMERE PROTEIN E 1 604 - -
Bda05g00688 966 MobiDBLite consensus disorder prediction 436 457 - -
Bda05g00688 966 MobiDBLite consensus disorder prediction 348 389 - -
Bda05g00688 966 SMART kinesin_4 3 258 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda05g00688 966 PANTHER KINESIN-LIKE PROTEIN KIN-12F 615 966 - -
Bda05g00688 966 PANTHER KINESIN-LIKE PROTEIN KIN-12F 1 604 - -
Bda05g00688 966 Coils Coil 257 277 - -
Bda05g00688 966 Gene3D Kinesin motor domain 1 290 IPR036961 -
Bda05g00688 966 PRINTS Kinesin heavy chain signature 111 128 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda05g00688 966 PRINTS Kinesin heavy chain signature 146 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda05g00688 966 PRINTS Kinesin heavy chain signature 200 221 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda05g00688 966 MobiDBLite consensus disorder prediction 348 381 - -
Bda05g00688 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 282 IPR027417 -
Bda05g00688 966 Coils Coil 832 859 - -
Bda05g00688 966 ProSiteProfiles Kinesin motor domain profile. 1 250 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda05g00688 966 Coils Coil 870 925 - -
Bda05g00688 966 Pfam Kinesin motor domain 15 248 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00688 K10400 KIF15; kinesin family member 15 - qsu:111991880 995.342
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00688 Bda-Chr5:55183225 Bda11g00439 Bda-Chr11:4658516 8.46E-07 dispersed
Bda05g00688 Bda-Chr5:55183225 Bda12g00948 Bda-Chr12:40545553 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g604 . . . . Bpe09g00138 . Bma10g00586 Bma13g01105 Cmo16g00977 . . . . . . . . . . . . . . . Cla10g00437 Cam10g0436 Cec10g0458 Cco10g0447 Clacu10g0444 Cmu10g1275 Cre10g0691 . . Cone14ag1198 Cone15ag1218 . Csa03g00446 . Cme06g02803 Blo07g00875 . Bda05g00688 . . Bpe03g00762 . . . . . . Cma16g00939 . Car16g00903 Cpe14g00763 . Bhi11g00510 . . . . . . . . . . . . . Lsi05g00529 . Chy06g01871 .
Vvi19g661 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda05g00688 . . Bpe03g00750 . Bma14g00130 . . . . . . . . . . . . . . . . . . . . . . . . . Chy01g01118 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004807 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 4 1 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda05g00688 Bda_Chr05 FPKM 3.539427 3.067855 0.0 0.0 0.0 0.0 0.0 0.255944 0.108453