Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00702 ATGAGGAAAGGAAGAGGATCGGCCGTTGCTCGGCCGGTGGCTTCTCCACTCGCCGTAGCGGGAGAATCGGCTGTGCCTCTTGGAAAATCGGTGGCCGCGGGATCGATTTCGAGGAATATTCTGGCCAAAGAGCCCAGATACAGAGGTGTGAGGAAAAGGCCGTGGGGGAGATTCGCGGCTGAGATCAGAGACCCCTGGAAAAAGAGTAGAGTGTGGCTTGGGACTTTCGATTCGGCCGAGGATGCTGCCCGTGCCTACGATGCTGCCGCTCGGACGCTCCGTGGTCCGAAGGCGAAAACTAATTTTTCTCTTTCGAATCCTAATTTTCTTGATTTTCCTTATCACCATAACGCGATCGTTCAAAATAACGTTCCTGGCCTCGATCCGTTCATTGATCGTCGGTTTTATGGTGGAAATGGCTTCCAAGAGCACCAGATTAATCCGCATAGACCGACCTCTAGCAGTTTGAGCTCCACCGTCGAGTCTTTCAGTGGGCCTAGACCTCGATCGGCGACCTTGACAGCTCCAACGACAGCTTCGGCCTCAGCCTTGCGGCGGCACCCTCGTACACCGCCTGTGTCTCCGGAAGACTGCCATAGTGACTGCGACTCGTCGTCGTCAGTGATTGAAGACGGGGATATAACCTCATCGTCCATGTTCCGGAAACCGATTCAAATCGACCTCAATTTCCCTCCTCTCGAAGACGGAGACTTTCCCGGTGACGATCTCCAATGTACTGCTTTATGCCTTTGA 753 53.78 MRKGRGSAVARPVASPLAVAGESAVPLGKSVAAGSISRNILAKEPRYRGVRKRPWGRFAAEIRDPWKKSRVWLGTFDSAEDAARAYDAAARTLRGPKAKTNFSLSNPNFLDFPYHHNAIVQNNVPGLDPFIDRRFYGGNGFQEHQINPHRPTSSSLSSTVESFSGPRPRSATLTAPTTASASALRRHPRTPPVSPEDCHSDCDSSSSVIEDGDITSSSMFRKPIQIDLNFPPLEDGDFPGDDLQCTALCL 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 55301536 55302288 - Bda021839.1 Bda05g00702 7014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00702 250 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Bda05g00702 250 MobiDBLite consensus disorder prediction 199 216 - -
Bda05g00702 250 MobiDBLite consensus disorder prediction 145 184 - -
Bda05g00702 250 CDD AP2 45 102 IPR001471 GO:0003700|GO:0006355
Bda05g00702 250 Gene3D AP2/ERF domain 46 105 IPR036955 GO:0003700|GO:0006355
Bda05g00702 250 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Bda05g00702 250 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Bda05g00702 250 MobiDBLite consensus disorder prediction 141 216 - -
Bda05g00702 250 Pfam AP2 domain 45 95 IPR001471 GO:0003700|GO:0006355
Bda05g00702 250 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 31 230 - -
Bda05g00702 250 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 31 230 - -
Bda05g00702 250 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Bda05g00702 250 SUPERFAMILY DNA-binding domain 46 105 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00702 Bda12g00930 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00702 Bda-Chr5:55301536 Bda13g00708 Bda-Chr13:8336371 5.02E-43 dispersed
Bda12g00930 Bda-Chr12:40421460 Bda05g00702 Bda-Chr5:55301536 1.11E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15902 PF00847 AP2 1.30E-14 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00702 K09286 - pvy:116145234 257.299