Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00734 ATGTCTGAACTCGACGACCAGATTCCTACCGCCTTTGATCCGTTTGCTGATGCAAATGCTGAGGACTCTGGTGCTGGGGCAAAAGAGTATGTGCACATTCGAATTCAACAGCGGAATGGTAGGAAGAGTCTCACAACTGTGCAGGGACTGAAGAAAGAATTCAGCTACAACAAGATATTGAAGGACCTTAAGAAGGAGTTTTGCTGCAATGGTACAGTTGTTCAGGACCCAGAGCTAGGACAGGTTATCCAACTTCAAGGCGACCAACGGAAAAATGTGTCTACATTCCTTATCCAGGCTAATATTGTGAAAAAGGACAATATCAAGATTCATGGTTTCTGA 342 44.15 MSELDDQIPTAFDPFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLIQANIVKKDNIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 55711810 55712829 - Bda021878.1 Bda05g00734 7046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00734 113 PANTHER BNAA03G48450D PROTEIN 1 113 - -
Bda05g00734 113 MobiDBLite consensus disorder prediction 1 21 - -
Bda05g00734 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Bda05g00734 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Bda05g00734 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Bda05g00734 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Bda05g00734 113 Pfam Translation initiation factor SUI1 28 100 IPR001950 GO:0003743|GO:0006413
Bda05g00734 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 7 113 IPR005874 GO:0003743
Bda05g00734 113 Gene3D - 2 113 - -
Bda05g00734 113 SUPERFAMILY eIF1-like 6 113 IPR036877 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00734 Bda09g00387 CCT
Bda05g00734 Bda09g00387 ECH
Bda05g00734 Bda12g00894 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00734 Bda-Chr5:55711810 Bda07g00365 Bda-Chr7:4661914 5.27E-62 dispersed
Bda12g00894 Bda-Chr12:39679941 Bda05g00734 Bda-Chr5:55711810 2.71E-70 wgd
Bda05g00734 Bda-Chr5:55711810 Bda09g00387 Bda-Chr9:4936926 3.06E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00734 K03113 - gmx:100499833 220.705