Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g00734 | ATGTCTGAACTCGACGACCAGATTCCTACCGCCTTTGATCCGTTTGCTGATGCAAATGCTGAGGACTCTGGTGCTGGGGCAAAAGAGTATGTGCACATTCGAATTCAACAGCGGAATGGTAGGAAGAGTCTCACAACTGTGCAGGGACTGAAGAAAGAATTCAGCTACAACAAGATATTGAAGGACCTTAAGAAGGAGTTTTGCTGCAATGGTACAGTTGTTCAGGACCCAGAGCTAGGACAGGTTATCCAACTTCAAGGCGACCAACGGAAAAATGTGTCTACATTCCTTATCCAGGCTAATATTGTGAAAAAGGACAATATCAAGATTCATGGTTTCTGA | 342 | 44.15 | MSELDDQIPTAFDPFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLIQANIVKKDNIKIHGF | 113 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 55711810 | 55712829 | - | Bda021878.1 | Bda05g00734 | 7046 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g00734 | 113 | PANTHER | BNAA03G48450D PROTEIN | 1 | 113 | - | - | |
Bda05g00734 | 113 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bda05g00734 | 113 | CDD | eIF1_SUI1 | 29 | 112 | IPR005874 | GO:0003743 | |
Bda05g00734 | 113 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 101 | IPR001950 | GO:0003743|GO:0006413 | |
Bda05g00734 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | - | |
Bda05g00734 | 113 | PIRSF | Transl_init_SUI1_Euk | 1 | 113 | IPR005874 | GO:0003743 | |
Bda05g00734 | 113 | Pfam | Translation initiation factor SUI1 | 28 | 100 | IPR001950 | GO:0003743|GO:0006413 | |
Bda05g00734 | 113 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 7 | 113 | IPR005874 | GO:0003743 | |
Bda05g00734 | 113 | Gene3D | - | 2 | 113 | - | - | |
Bda05g00734 | 113 | SUPERFAMILY | eIF1-like | 6 | 113 | IPR036877 | GO:0003743|GO:0006413 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda05g00734 | Bda09g00387 | CCT | |
Bda05g00734 | Bda09g00387 | ECH | |
Bda05g00734 | Bda12g00894 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda05g00734 | Bda-Chr5:55711810 | Bda07g00365 | Bda-Chr7:4661914 | 5.27E-62 | dispersed | |
Bda12g00894 | Bda-Chr12:39679941 | Bda05g00734 | Bda-Chr5:55711810 | 2.71E-70 | wgd | |
Bda05g00734 | Bda-Chr5:55711810 | Bda09g00387 | Bda-Chr9:4936926 | 3.06E-75 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g00734 | K03113 | - | gmx:100499833 | 220.705 |