Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00735 ATGGAAGACAGCCTTAACGGGCATGAATCGTTCTTAGAACGTGGAATTCAAAAGGCTGAAAATAAAGACTTACCACTCATTGATTTAGGCCGGTTATCGGACAGACATTTCGATCGATCGGAATGCGTAAATGATATTGTTCGAGCAGCAACAGTGTGGGGTTTCTTCCAAGTGGTGAACCATGGAGTCCCAGAAGAGGTGTTGAAGGCTATGAAACATGAACAGAAGAAGGCGTTTCACGAACCAGAATACAGCAAAAATGAAAGTGGGTTTTATAATTTGAGGGAGTGTTATCGTTTGGGCAATCCAGTTGCTACGTCTGCAACCCAGATATCTTGGTCTGAAACTTTTCACATTGCTGTTAATGAAGTTTCGAGGTTGGATCAAAACAAAAATCTCAGACCAACCATTGAAGCTGTGGTAGCAAAGCTATCCAATATGGCTAAAAGCTTAGCTGAGATTTTAGGCAAGAATTTGGGTTTAAAATCTACTTACTTTGATGACAATTTTTATCTTCGCCTTAATCGATATCCTCCATGTCCCGTCGATTCTGAGATTTATGGTTTGATTCCTCACACAGACAGTGATTTCCTCACCATTTTATATCAAAATCAAGTCGAAGGACTACAGTTGTTTAAAGATGGAAAATGGTTTAGAGTCAAACCTAATCCTCAAGCTTTGATTATCAACATTGGAGACTTATTTCAGGCAATGAGCAACGATCTGTACAAAAGCCTGAAGCATAGAGTGATGGCAGCAAAAGGAGAAGAGAGATTATCATTTGCATTCTTCTACTGTCCTTCGAGTTACGCCATTATTGAAAGCTGCTCAAAACCAGGAGTTTACAAGTATTGA 855 39.65 MEDSLNGHESFLERGIQKAENKDLPLIDLGRLSDRHFDRSECVNDIVRAATVWGFFQVVNHGVPEEVLKAMKHEQKKAFHEPEYSKNESGFYNLRECYRLGNPVATSATQISWSETFHIAVNEVSRLDQNKNLRPTIEAVVAKLSNMAKSLAEILGKNLGLKSTYFDDNFYLRLNRYPPCPVDSEIYGLIPHTDSDFLTILYQNQVEGLQLFKDGKWFRVKPNPQALIINIGDLFQAMSNDLYKSLKHRVMAAKGEERLSFAFFYCPSSYAIIESCSKPGVYKY 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 55730172 55737782 + Bda021879.1 Bda05g00735 7047

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00735 284 Pfam 2OG-Fe(II) oxygenase superfamily 173 267 IPR044861 -
Bda05g00735 284 PANTHER 20-OXIDASE, PUTATIVE-RELATED 15 283 - -
Bda05g00735 284 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 267 IPR005123 -
Bda05g00735 284 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 123 IPR026992 -
Bda05g00735 284 Gene3D - 22 283 IPR027443 -
Bda05g00735 284 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 283 - -
Bda05g00735 284 SUPERFAMILY Clavaminate synthase-like 20 275 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00735 - - K04125 cmo:103501620 322.398
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda05g00735 Bda12g00891 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00735 Bda-Chr5:55730172 Bda14g01090 Bda-Chr14:9665962 4.21E-49 dispersed
Bda12g00891 Bda-Chr12:39631582 Bda05g00735 Bda-Chr5:55730172 1.20E-163 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g450 . . . . . . Bma10g00535 Bma13g01030 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda05g00735 Bda12g00891 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010893 2 1 0 2 0 1 2 1 1 1 1 1 2 1 1 2 1 0 1 1 1 1 2 1 1 1 1 0 1 0 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda05g00735 Bda_Chr05 FPKM 1.457601 1.833442 0.0 0.0 6.169159 6.229582 6.413547 0.439636 0.686579