Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00737 ATGGTTTCGCCGGAAAGCACCAATTGGCTCTTTGACTACGGATTGATCGACGATATCCCTGTCTCGCATGCTGCTTTCCCTGTCGCGAATTCCGGTTTCTCTTGGTCCATGCAGCCTCTCAACGCCTCCTCTAGTGTCAGTTTGGAAATTGAAGGATCTCTGGGGGAAACAGATTGCCTCAAGGAACCGGGCTCAAAGAAGAGAGTAAGACCTGAATCCAGTTGTGCATCTAGCTCGAAGGCATGTAGAGAGAAGTTGCGGAGAGACAGGCTGAATGACAAGTTCCTGGAATTGGGCGCTATATTGGAGCCTGGAAGGCTGCCCAAAACAGACAAGGCAGCTATATTGAATGATGCCATTCGAATGGTAACCCAGATGAGGACTGAAGCTCAGAATCTGAAAGACTCAAATTCAAGTCTACAGGAGAAGATTAAAGAGCTGAAGGTGGAGAAAAATGAGCTTCGTGATGAGAAACAGAGGCTAAAAGGAGAGAAGGAGAAACTGGAGCAACAAATGAAATCTATGAAGACACCGCCCAGCTTCTTGTCTCCTGCTGCAATGACAGCAGCATTTGGTGCTCCCGGCCAAGCTCCTGGCAGTAAGTTGGTGCCTTTCATCGGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCAACTTCAGTCGACACATCACAGGATCATGTCCTCCGTCCTCCGGTTGCTTAA 708 49.15 MVSPESTNWLFDYGLIDDIPVSHAAFPVANSGFSWSMQPLNASSSVSLEIEGSLGETDCLKEPGSKKRVRPESSCASSSKACREKLRRDRLNDKFLELGAILEPGRLPKTDKAAILNDAIRMVTQMRTEAQNLKDSNSSLQEKIKELKVEKNELRDEKQRLKGEKEKLEQQMKSMKTPPSFLSPAAMTAAFGAPGQAPGSKLVPFIGYPGVAMWQFMPPTSVDTSQDHVLRPPVA 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 55743085 55744944 - Bda021881.1 Bda05g00737 7049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00737 235 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Bda05g00737 235 CDD bHLH_AtILR3_like 83 155 - -
Bda05g00737 235 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Bda05g00737 235 MobiDBLite consensus disorder prediction 59 78 - -
Bda05g00737 235 Gene3D - 77 152 IPR036638 GO:0046983
Bda05g00737 235 SMART finulus 81 132 IPR011598 GO:0046983
Bda05g00737 235 Coils Coil 116 174 - -
Bda05g00737 235 PANTHER TRANSCRIPTION FACTOR ILR3 1 235 - -
Bda05g00737 235 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 151 IPR036638 GO:0046983
Bda05g00737 235 PANTHER BHLH TRANSCRIPTION FACTOR 1 235 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00737 Bda07g00338 CCT
Bda05g00737 Bda07g00338 ECH
Bda05g00737 Bda12g00887 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00737 Bda-Chr5:55743085 Bda13g00632 Bda-Chr13:7301859 1.62E-68 dispersed
Bda11g00625 Bda-Chr11:6271026 Bda05g00737 Bda-Chr5:55743085 1.39E-28 transposed
Bda12g00887 Bda-Chr12:39604560 Bda05g00737 Bda-Chr5:55743085 4.82E-137 wgd
Bda05g00737 Bda-Chr5:55743085 Bda07g00338 Bda-Chr7:4458922 4.37E-111 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15906 PF00010 HLH 9.90E-09 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00737 - - zju:107431674 362.073