Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00753 ATGGCTTCCCAGCAAGAAATTTCTCATGCTTCACACAGTCACTATAACGATCACGAAGGAACGGACGAAGAAGATGAGGAAGAAGAAGACGAAAGTTATCAAAGTGGAGACAGCAAAAAGAGAAATTGTTACAGAAATGGGTGGCCAATAGGAGGTGTTTTGGATCCAAGAGCCAAATGGGTTCAAGATTGGAATAGGGTTTTCCTCCTAGTCTGCGCCACAGGCCTCATTGTGGACCCACTCTTTTTCTACGCCCTATCAATAAGTGACACCTATATGTGTCTCTTTGTCGACGGCTGGTTTGCCATCACCGTGACGGCGCTCAGGTGCATGACAGACGCCCTGCACGTGTGGAACATTTGGTTGCAGCTGAAAATGGCGAAGCGGTTCTCGTTTGGCAATATCGGAGCCGTGGAAGAAGAAGAAAGTGGTGGAATTATGAGGGATTATGGAAGTCCTCGCTCTGTCGCTCTTCGTTACTTGAAGGCTAAAAAGGGTTTCTTCTTTGATCTCTTTGTTATTCTTCCGTTACCCCAGTTTGTATTATGGGTAGCAATTCCATGGCTGTTGAAAAGAGGATCAGTAACAATGGTGATGACTGTGTTTTTTATAATATTTCTGTTCCAATACCTTCCCAAAATCTATCATTCTGTCTGCCTCTTACGTCGCATGCAGAATCTCTCTGGCTACATTTTCGGAACTGTCTGGTGGGGTATTGCTCTAAATATGATAGCCTATTTTGTTGCTGCCCATGCAGCAGGAGCGTGTTGGTACCTGCTGGGGATTCAAAGGGCAGATAAGTGTCTGAAACAGCAATGCAGAGAAGCAGAATCCTGTAATCCGAGAGTGTTGGCTTGTAAAGAAGCCATTTTTTATGGGGCAACGAGCATGGTGGAAGAGAGGTCAGAGAGATTTGCGTGGGCTGTGAACAAGAAAGCAAGGTCTATGTGCTTGGAAAGTGCAGAGAACTATAACTATGGAGCTTATAAATGGACTGTTCAGCTCGTCACCAATGATAGTCGCTTGGAGAAGATTCTTTTCCCAATCTTTTGGGGCTTGATGACTCTTAGTACATTTGGGAACTTGGAAAGCACGACAGAATGGCTAGAAATTGTCTTCAACATCATTGTATTAACCAGTGGACTACTTTTAGTGACCATGTTGATCGGAAATATTAAGGTGTTTTTACATGCAACTACGTCCAAGAAACAAGCCATGCAGTTAAAGATGAGGAATGTAGAGTGGTGGATGAGGAAGAGGTACTTACCTCAAGGATTCCGGCAACGTGTTCGTAACTATGAGCGGCAAAGATGGGCCGCCATGCGTGGCGTTGACGAGTGTGAGATGATTAGAAACCTGCCGGAGGGACTCCGGAGAGACATCAAGTATCATTTGTGCTTGGATTTGGTCAGACAGGTGCCTTTATTCCAACACATGGATAATCTAGTTCTCGAAAACATTTGCGACCGAGTAAAGTCTCTCATTTTCACCAAGGGCGAAACGATAGCTAGCGAAGGAGACCCAGTTCAAAGAATGCTGTTTGTAGTAAGAGGCCATCTTCAAAGCAGCCAAGTTCTAAGAGATGGAGTCAAAAGCTGTTGCATGTTAGGCCCCGGAAATTTCAGTGGAGATGAGCTTCTCTCATGGTGTCTCCGAAGACCATTTATCGAAAGATTACCTCCGTCGTCCTCGACTCTCGTCACTCTCGAGACCACGGAGGCCTTCGGCTTGGAGGCCGAGGATGTAAAATACGTGACGCAACATTTTCGTTACACGTTCGTGAACGAAAAGGTCAAGAGAAGTGCGAGATATTACTCGCCCGGCTGGAGGACTTGGGCTGCAGTTGCAATTCAGCTAGCTTGGAGAAGATACAAGCATCGATTGACACTTTCCTCGTTGTCGTTTATTCGCCCTCGTCGGCCGCTGTCTCGATCTTCGTCGATAAGTGAAGACAGGCTCAGGCTCTACACTGCTTTGCTCACTTCACCAAAGCCTAATCAAGAAGAGAGTGATTTTTGA 2019 45.81 MASQQEISHASHSHYNDHEGTDEEDEEEEDESYQSGDSKKRNCYRNGWPIGGVLDPRAKWVQDWNRVFLLVCATGLIVDPLFFYALSISDTYMCLFVDGWFAITVTALRCMTDALHVWNIWLQLKMAKRFSFGNIGAVEEEESGGIMRDYGSPRSVALRYLKAKKGFFFDLFVILPLPQFVLWVAIPWLLKRGSVTMVMTVFFIIFLFQYLPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGIQRADKCLKQQCREAESCNPRVLACKEAIFYGATSMVEERSERFAWAVNKKARSMCLESAENYNYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEIVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNVEWWMRKRYLPQGFRQRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDNLVLENICDRVKSLIFTKGETIASEGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLSSLSFIRPRRPLSRSSSISEDRLRLYTALLTSPKPNQEESDF 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 56003081 56007389 - Bda021902.1 Bda05g00753 7065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00753 672 CDD CAP_ED 475 581 IPR000595 -
Bda05g00753 672 SUPERFAMILY Voltage-gated potassium channels 57 396 - -
Bda05g00753 672 Gene3D Helix hairpin bin 400 466 - -
Bda05g00753 672 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 16 669 - -
Bda05g00753 672 ProSiteProfiles cAMP/cGMP binding motif profile. 475 585 IPR000595 -
Bda05g00753 672 Gene3D Jelly Rolls 473 591 IPR014710 -
Bda05g00753 672 MobiDBLite consensus disorder prediction 1 38 - -
Bda05g00753 672 Pfam Ion transport protein 64 392 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bda05g00753 672 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 16 669 - -
Bda05g00753 672 SUPERFAMILY cAMP-binding domain-like 401 589 IPR018490 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00753 Bda-Chr5:56003081 Bda07g01333 Bda-Chr7:16097327 5.71E-09 dispersed
Bda05g00753 Bda-Chr5:56003081 Bda15g00779 Bda-Chr15:11637413 6.25E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00753 K05391 - tcc:18593814 1088.56