Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00782 ATGGGGATAAGAGGGAGTGGAGGAGAGATCGTGGAGGTTCAAGGAGGTCACATTGTTCGCTCCATTGGAAGAAAAGATCGACATAGCAAGGTCTGCACGGCGAAAGGGCCGAGAGATCGCCGGGTTCGCCTCTCCGCCCACACTGCCATTCAGTTTTACGACGTTCAAGATCGTCTCGGCTATGACCGACCCAGTAAAGCCGTCGATTGGCTCATTAAAAAGGCCAAAAACGCCATTGACGAGCTCGAAGAACTTCCGGCATGGAAGCCGAATGCATTAAACTCAATTCCTCTGCAGCAACGAACGAAACGTTTGGTTAAAGATGGAGAGAACCCGGATGGTGCTCAGTCCAATATTGCGAATTCTTCTAGTTCTCTTAGATCAACAATGGCGGGTGGTGGTAGTATTACTCTGCAAAATTTACAGTTTTTGCCGATGGGAGAGACGCCGCATAACAGTACCTCTAGTCTTCTCCCTCCGTCACTGGACTCAGACTCCATAGCTGACACCATCAAGTCCTTTTTCCCGATGGGGGCGACGACGTCGCCGGAGATACCATCGTCGTCTATTCAGTTTCAGAGCTATCCTCCGGCCGGAGATCTGCGGCTCTCTTTGCAGTGCTTTAAAAACCCGCTTTTACTCCATCATCATCAATCTCAGCCACAAAATCATCAAAACGAGCATGTTTTCTTCTCTGGAGCATCTCCATTACCGGTGCTTGACGGAATTACTCCGGCCCACTGGGGGGAGCAGGGAAACAACGCCCACCCACCGCTGGAGATCGGCCGGTTTCAGAGGATTGTTTCTTGGAATGGTTCTGGTGCAGAAACCGGTACTGGAAGTGATCAGCACGGAGCTGGAAATGGGAGTTTCATCTTCAATCTGCCTTCTCCGCCACCTCCGCCACCTCCGCCGCCGTTGTTGCAGCCGTTATTCGGCGAAACGCAGCTATTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACACCCATGTTTCGCGCTTGGATAGACCCATCATCAACTCCTTCCACAAACCATCAGATTCTGTCACCAGTCCACCAAGCGTTGTTTTCCGGCTACGGACTCGACTCCTGCGGGTTCCCAGGGTTCCGCATTCCGGTGCGTATTCAGGGTGTAGAGGAGCATGACAGCATCTCCGACAAGCCGTCCTCTGCCTCCTCCGATTCTCGCCATTGA 1197 52.38 MGIRGSGGEIVEVQGGHIVRSIGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDELEELPAWKPNALNSIPLQQRTKRLVKDGENPDGAQSNIANSSSSLRSTMAGGGSITLQNLQFLPMGETPHNSTSSLLPPSLDSDSIADTIKSFFPMGATTSPEIPSSSIQFQSYPPAGDLRLSLQCFKNPLLLHHHQSQPQNHQNEHVFFSGASPLPVLDGITPAHWGEQGNNAHPPLEIGRFQRIVSWNGSGAETGTGSDQHGAGNGSFIFNLPSPPPPPPPPPLLQPLFGETQLFSQRGPLQSSNTPMFRAWIDPSSTPSTNHQILSPVHQALFSGYGLDSCGFPGFRIPVRIQGVEEHDSISDKPSSASSDSRH 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 56270565 56271832 - Bda021935.1 Bda05g00782 7094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00782 398 MobiDBLite consensus disorder prediction 114 129 - -
Bda05g00782 398 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 398 IPR005333 GO:0003700
Bda05g00782 398 MobiDBLite consensus disorder prediction 271 311 - -
Bda05g00782 398 MobiDBLite consensus disorder prediction 107 129 - -
Bda05g00782 398 Pfam TCP family transcription factor 24 108 IPR017887 -
Bda05g00782 398 MobiDBLite consensus disorder prediction 294 310 - -
Bda05g00782 398 MobiDBLite consensus disorder prediction 271 290 - -
Bda05g00782 398 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Bda05g00782 398 PANTHER TRANSCRIPTION FACTOR TCP4 2 398 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00782 Bda12g00823 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00782 Bda-Chr5:56270565 Bda07g00262 Bda-Chr7:3511873 9.33E-91 dispersed
Bda12g00823 Bda-Chr12:37667784 Bda05g00782 Bda-Chr5:56270565 2.56E-155 wgd
Bda05g00782 Bda-Chr5:56270565 Bda09g00513 Bda-Chr9:6784640 1.30E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15909 PF03634 TCP 2.30E-31 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00782 - - csv:101206841 411.764