Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00798 CTCATGAAAGCAAGCAGTAATTTGGGGCTTAATGGTTTTTTCACGTTAGCCCATTACAACTTGCCTCGTCTAAGGATGAAGAATGAAGGACTGCTAAATCTCCACTCATTCTCCTCAACTTTTCCATTTTCTATGCGAACAATTGTCAGATTATCCTCTGTCAATGTCGCCCATGGTTATACTGTTCAAATTAACAAGTTGAACCCGTGCACTAGAAGTTGCCTCAACAATTCATTCATTGTTCCCAGAGATGTCAAATATGGCAATAAGCAAATCATAAGTGTTACTCCATCACTTTATGAGTACATCCTTGCCAATGTTCGAGAACCTGAGATTCTACGGCAACTTAGAGAGGAGACTGCATTAATACGTGGGAGCCAGATGCAGGTGGTCTCTCCTGATCAAGCACAGCTTCTCGCTACGTTGGTTCAGATTATGGGAGCTGAACGGTGTATTGAAGTTGGTGTTTACACTGGATATTCATCGTTAGCTGTTGCACTAGTCCTGCCGGAATCTGGTCGTTTAGTCGCATGTGAAAGAGATGCCAGAGCACTTGAGATTGCAAAAAGATACTATGAGCACGCTGGTGTATTACACAAGGTGGATGTGAGACATGGCCTTGCAGCAGATGAACTGAGATCACTAATTAGGAATGGCGAAACTTGCAGCTATGATTTTGCATTCATCGATGCTGACAAGAGGAAGAATGAGGAGTATTTTGAACTGTTACTACAACTAGTGAGGGTTGGAGGGGTTATTGTCGTCGATAACGTCTTGTGGCACGGGAAAGTTGCAGACCCGACAGTACACGATGCCAAGACAGCTAGCATTCGGAACTTCAACAAAAAGCTCTTGGCCGACGAGCGCGTAAGCACCAGCATGGTACCCATTGGAGACGGAATTACAATCTGCCGAAAAAGATAA 924 44.05 LMKASSNLGLNGFFTLAHYNLPRLRMKNEGLLNLHSFSSTFPFSMRTIVRLSSVNVAHGYTVQINKLNPCTRSCLNNSFIVPRDVKYGNKQIISVTPSLYEYILANVREPEILRQLREETALIRGSQMQVVSPDQAQLLATLVQIMGAERCIEVGVYTGYSSLAVALVLPESGRLVACERDARALEIAKRYYEHAGVLHKVDVRHGLAADELRSLIRNGETCSYDFAFIDADKRKNEEYFELLLQLVRVGGVIVVDNVLWHGKVADPTVHDAKTASIRNFNKKLLADERVSTSMVPIGDGITICRKR 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 56439697 56444193 + Bda021954.1 Bda05g00798 7110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00798 307 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 89 307 IPR002935 GO:0008171
Bda05g00798 307 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 79 307 - -
Bda05g00798 307 Pfam O-methyltransferase 107 306 IPR002935 GO:0008171
Bda05g00798 307 Gene3D Vaccinia Virus protein VP39 89 307 IPR029063 -
Bda05g00798 307 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 307 IPR029063 -
Bda05g00798 307 CDD AdoMet_MTases 150 255 - -
Bda05g00798 307 PANTHER O-METHYLTRANSFERASE-RELATED 79 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00798 Bda-Chr5:56439697 Bda14g00513 Bda-Chr14:3727678 1.03E-40 dispersed
Bda05g00798 Bda-Chr5:56439697 Bda08g00880 Bda-Chr8:15873772 7.51E-43 transposed
Bda05g00798 Bda-Chr5:56439697 Bda08g00783 Bda-Chr8:10557312 7.59E-43 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00798 - - jre:108994419 374.785