Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00801 ACAATGGCGGACGAGGTTCTTCTTCTGGATTTCTGGGCCAGCCCTTTTGGGATGAGGGTGAGGATTGCGTTGGCGGAAAAGGGTATCGAGTATGAGTATAAAGGGGAGGATTTGAGGAACAAGAGCCCTCTTCTTCTTCAGGTGAACCCGGTTCATAAGAAGATTCCGGTTCTCATTCACAATGGGAAGCCTGTTTGTGAGTCCCTGATTGCTGTGGAGTATCTTGACGATGTTTGGCCGGAGAAATCTCCATTGCTGCCGGCCGATCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTTTGTGGACAAGAAGAAAACACTATGGCAGATAAATGAGATGGGGAGGAATTTGTGGCTGACAAAAGGAGAAGAACTAGAAACCTCAAAGACTGAATTCATAGAGTGCTTGAAGATAATGGAAGCAGAGCTTGGAGACAAAACCTTCTTTGGAGGTGAGTGTTTCGGGTTCCTCGACGTGGCGTTCGTCCCGTTCTACACATGGTTTTCGGTCTACGAGAAGTTTGGAAATTTGAGCATCGAGGGGGAATGTCCTAAACTCATTGCATGGGTCAAAAGATGCTTGGAGAAAGAGAGTGTTTCTAAGTCTCTTGCTGATCAGGAGAAGGTTTATGGCTTTGTTTTGCAGATGAGAAAGGCATTTGGGTTAGAGTAG 678 46.76 TMADEVLLLDFWASPFGMRVRIALAEKGIEYEYKGEDLRNKSPLLLQVNPVHKKIPVLIHNGKPVCESLIAVEYLDDVWPEKSPLLPADPFLRSQARFWADFVDKKKTLWQINEMGRNLWLTKGEELETSKTEFIECLKIMEAELGDKTFFGGECFGFLDVAFVPFYTWFSVYEKFGNLSIEGECPKLIAWVKRCLEKESVSKSLADQEKVYGFVLQMRKAFGLE 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 56458421 56459258 + Bda021957.1 Bda05g00801 7113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00801 225 CDD GST_C_Tau 90 218 IPR045074 GO:0004364|GO:0006749
Bda05g00801 225 Pfam Glutathione S-transferase, N-terminal domain 8 76 IPR004045 -
Bda05g00801 225 Gene3D - 89 225 - -
Bda05g00801 225 SFLD Main.3: Omega- and Tau-like 2 223 IPR045073 -
Bda05g00801 225 CDD GST_N_Tau 6 79 - -
Bda05g00801 225 SUPERFAMILY Thioredoxin-like 6 105 IPR036249 -
Bda05g00801 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Bda05g00801 225 SUPERFAMILY GST C-terminal domain-like 77 221 IPR036282 -
Bda05g00801 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 220 IPR045073 -
Bda05g00801 225 Gene3D Glutaredoxin 2 88 - -
Bda05g00801 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 222 IPR010987 -
Bda05g00801 225 PANTHER S-TRANSFERASE TAU 22, PUTATIVE-RELATED 5 220 - -
Bda05g00801 225 Pfam Glutathione S-transferase, C-terminal domain 130 194 - -
Bda05g00801 225 SFLD Main (cytGST) 2 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00194 Bda-Chr1:24604886 Bda05g00801 Bda-Chr5:56458421 3.40E-52 dispersed
Bda05g00801 Bda-Chr5:56458421 Bda12g00805 Bda-Chr12:37130995 4.32E-114 dispersed
Bda12g00804 Bda-Chr12:37100499 Bda05g00801 Bda-Chr5:56458421 5.35E-125 wgd
Bda12g00804 Bda-Chr12:37100499 Bda05g00801 Bda-Chr5:56458421 5.35E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00801 K00799 - cpap:110812529 352.443