Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00805 ATGCACTCAAGAAGGATCTCAAAGAGATGGATTTTTTCACCGAGTATGGGGATGCCAACAGATATAAGATTCTTCGAAATTATTGGAAAGGGTAGTTATGGAGTTGTTTGTGCAGCAATTGATACGCATACTGGGGAAAAAGTGGCTATAAAGAAAATTCACGACATTTTTGAGCATATATCGGATGCCACTCGGATCCTCCGTGAAGTAAAGTTGCTGAGGCTTTTACGACATCCTGATATCGTTGAGATTAAGCGCATCATGTTGCCTCCTTCAAAGAGGGAGTTTAAAGATATTTTTGTTGTTTTTGAGCTTATGGAATCTGATCTTCATCAAGTCATCAAAGCTAATGATGATTTAACCCGGGAGCACCATCAATTTTTTCTTTATCAGATGCTACGTGCCTTAAAATATATGCATACTGCAAATGTTTATCATCGAGATCTTAAGCCAAAAAATATATTGGCAAATGCTAATTGTAAGCTTAAAATATGTGATTTTGGACTAGCAAGAGTTGCATTCAGTGATACTCCAAGCACAATATTTTGGACGGACTATGTTGCCACAAGATGGTACAGAGCTCCAGAGCTTTGTGGGTCATTTTTCTCCAAGTATACGCCTGCAATCGATATATGGAGCATCGGATGCATCTTTGCTGAAATATTGACAGGGAAGCCATTGTTTCCTGGGAAAAGCGTAATTCATCAATTAGATTTGATCACTGATCTTCTTGGTCGACCTTTATCAGAAACCATTTCAGGAGTTCGAAATGAGAAGGCTAGGAAATACTTGAGCGAAATGCGGAAAAAATCTCCTGTATCGTTTTCACAGCGATTTCCTAATGTTGATCCATTAGCACTCCGATTACTAGAAAGGCTGTTAGCTTTTGATCCGAAAGACCGACCAACTGCTGAGGAGGCACTGGCCGATCCTTATTTCAAGGGTCTAGCCAAAGTTGAAAGAGAGCCTTCTTGTCAGCCAATTTCCAAATTGGAATTCGAGTTCGAGAGGCGGAGGGTGACGAAGGAGGATATTAGGGAAATACTGTACAGAGAGATACTCGAATACCATCCTCAGCTTCTCAAAGACTATATGAACGGAATGGATGGCACAAATTTTCTCTATCCGAGCGCTATTGGTCACTTCCAAAAACAGTTTGCTCATTTGGAGGAAAATGGCAGCAAAAGTGCGCTTGTTGCGCCTCTCGAGAGAAAGCATGTTTCCCTCCCACGGCCGAGTATTTACTCAAGTACAGTTTCTTCAGTCACACACCCAAATTTGTGTTCATCTGACAGCCGACAAGCGAAGGAGGAGACCTCTGATAAAGTTAAAGCAGAGAGTGTTGGAAATCAGTCAAAGGTTTCACGCCCTCCACCCAGAGTGCCAATGGCAAAACCAGGGAGAGTTGTGGGACCCGTTCTACCGTACGAACCGAAAGATCTTTACGACCCAAGAATCATTCACAGAAGTGCCATTCGCTCTCCTCAAGTCGTTTCGCCGCACTGTTTCTTCCGAGCTCGGTCCTCTGTAAATCCAAAGCCTGGATTGGAGGCTGAAAAAGATAGTTCAGTAGCCATACAACCTCAACCATATAATTTGGCATCAAAAGTTGCCATTATTGACTCTAACTCTAACCCATATCATCACTCTAAAGCGGAAGTAGACGAGTTCAACGAGAGAATAGTCATTGATGGAAAGCTACTACATGGGCAGTCTCAGTTTGGAGCTGCAGCCATGACCATGGCTGCTCATAGAAGTGCAGGAGCTGTCAAGTATTGA 1779 42.61 MHSRRISKRWIFSPSMGMPTDIRFFEIIGKGSYGVVCAAIDTHTGEKVAIKKIHDIFEHISDATRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIFVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPSTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEILTGKPLFPGKSVIHQLDLITDLLGRPLSETISGVRNEKARKYLSEMRKKSPVSFSQRFPNVDPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKLEFEFERRRVTKEDIREILYREILEYHPQLLKDYMNGMDGTNFLYPSAIGHFQKQFAHLEENGSKSALVAPLERKHVSLPRPSIYSSTVSSVTHPNLCSSDSRQAKEETSDKVKAESVGNQSKVSRPPPRVPMAKPGRVVGPVLPYEPKDLYDPRIIHRSAIRSPQVVSPHCFFRARSSVNPKPGLEAEKDSSVAIQPQPYNLASKVAIIDSNSNPYHHSKAEVDEFNERIVIDGKLLHGQSQFGAAAMTMAAHRSAGAVKY 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 56516369 56520720 + Bda021962.1 Bda05g00805 7117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00805 592 MobiDBLite consensus disorder prediction 418 466 - -
Bda05g00805 592 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 469 - -
Bda05g00805 592 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 22 469 - -
Bda05g00805 592 SUPERFAMILY Protein kinase-like (PK-like) 23 317 IPR011009 -
Bda05g00805 592 MobiDBLite consensus disorder prediction 418 433 - -
Bda05g00805 592 Pfam Protein kinase domain 25 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00805 592 ProSitePatterns Protein kinases ATP-binding region signature. 28 52 IPR017441 GO:0005524
Bda05g00805 592 Gene3D Transferase(Phosphotransferase) domain 1 108 336 - -
Bda05g00805 592 ProSiteProfiles Protein kinase domain profile. 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00805 592 Gene3D Phosphorylase Kinase; domain 1 37 359 - -
Bda05g00805 592 SMART serkin_6 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00805 592 CDD STKc_TDY_MAPK 23 358 - -
Bda05g00805 592 ProSitePatterns MAP kinase signature. 57 160 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00805 Bda-Chr5:56516369 Bda14g01424 Bda-Chr14:18016718 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69635 PF00069 Pkinase 2.20E-65 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00805 - K04371 rcu:8258703 892.878