Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00811 ATGATGAATATGCAAGAATTGATCCTGAGAAACTGTCTCATCAATGATACAATTCCTCCATCTATTGGAGCAATGAATAATCTCAAAGTCTTAGACTTGAGCTTTAACAAGTTGACTGGTTCGATTCCCCAAGCATTCCAGAATCTATTAAGCCACATCGATTACATCTTTTTGACCAACAACTCACTGACTGGAGAAGTGCCAAGTTGGACTTCGACTAACAATAAGAACATAGATCTATCTTACAACAATTTCACAGGGGCAATGCGATCTAGTTGCCAAATGTCAACTCAGAATTTAGTTTCCAGTTATTTGCCATCAGCAAACGAAGAAGTATCTTGGTGCTTACAGAAAGATCTTCCATGCTCTGGAAACGCTGAATATCATTCCTTGTTTATCAATTGTGGAGGAAGAAGAGTAGAAATTGATGGAAATCAATATGAAGAGGACTTGTTTAGTGAAGGCAGATCAAACTTTTATTCAGTTGGAGAAAGGTGGGGTTACAGCAGTACAGGGATTTTCATGGGTGCGGAGGATGCTCCTAACTTAGCAGAGAATACCTTTGGTCTGAACTTGAGTGGGCCGAGCTTCTATGAGACAGCTCGACTCTCCCCTCTGTCACTTAAGTACTATGGCCTTTGCCTTCGAAAGGGGAGTTATAATGTCAAGCTGCATTTTGCTGAAATAATGTATTCTGATAACCAGAATTTTAGTAGTCTGGGGAGGCGTATATTTGATGTCTCAATTCAAGGAAATTTAGTTTTAAAGGACTTTAATATTGTGGAAAAAGCTGGAGGAGTTGGTAAAGGCTACACTTACGAAAATACAGATGTTATTGTTAATGGGAGCACTCTAGAGATCCACTTATACTGGGCGGGTAAAGGAACTACTGCTATTCCAGACAGAGGAGTTTACGGACCTCTTATATCTGCTATCACAATAACACCAAACTATGAGGTTGAGACAGGAGGCTTATCCGCTGGAGCTATTGCTGGCATTGTAATTGCTTCATGTGTGCTAGTCATATTGGTACTTGTTGTCCTTTGGCTCAAAGGTTACATATGTGCAAAAGAGATTGTGGACAGTGAATTGCAAGGGCTTGAATTGCAAACAGGTTATTTCTCTTTGAGACAAATCAAATCTGCTACCGGCAACTTTGATCCTAAAAATAAGATTGGTGAAGGAGGCTTTGGACCAGTATACAAGGGAGTTCTTTCAGACGGATCCTTAATTGCTGTCAAGCAACTTTCCTCTAAATCGAAGCAAGGGAATCGTGAATTTGTCACTGAAATAGGCATGATATCTGCTTTGCAGCACCCAAATCTTGTTAGGCTTTATGGGTGTTGCATTGAAGGACATCAGTTGTTGCTAATATATGAATATATGGAAAACAATAGTCTCGCACGTGCTCTCTTTGGTGCCCAGGAACATCGTCTACACTTAGACTGGGCAACAAGGAAGAAGATATGCATGGGAATAGCGAAGGGATTAGCTTATCTTCACGAGGAATCGAGGTTGAAAATTGTGCACAGAGATATAAAGGCTACAAATGTGCTGCTTGATAAAAATCTAACGGCAAAGATCTCTGACTTTGGCTTGGCGAAGCTTGATGAAGAGGAGAATACCCACATTAGTACTCGGATTGCTGGAACCATAGGTTACATGGCTCCTGAATATGCAATGAGGGGTTACTTAACTGATAAAGCAGATGTCTACAGCTTTGGTGTTGTGGCCTTGGAGATTGTCAGTGGAAAAAGCAACACAAATTACAGGCCAAAGGAAGAGTTTGTTTATCTTCTTGATTGGGCATATGTCCTGCAAGAGCAAGGCAACCTTCTAGAACTCGTGGATCCGAGCCTCGGTTCAAACTATTCAAAGGAAGAGACTATGACAATGCTCAACGTGGCACTCTTATGCACCAACCCATCTCCCACACTCAGACCCCCCATGTCTTCTGTAGTGCGCATGCTTGAAGGGAAAATTGCAGTCCAAGCACCCTTAGTCAAACGCACGACGGAGCAAGATGCAAGATTTAGGGCCTTTGAGAAGCTTTCACAAGACAGCCAAACAATAGTCTCGTCAATCTCTCAAGTCAGTCAGCTTCATAAAAGCATGTCAATTGATGGGCCTTGGGTTGATTCCTCAGTTTCTGTTCAAAGTAAAGATGAAACCCGTGACCATTCTTCGTCAAGTAAGCTCTTGGGATCTTTGATATAA 2217 41.59 MMNMQELILRNCLINDTIPPSIGAMNNLKVLDLSFNKLTGSIPQAFQNLLSHIDYIFLTNNSLTGEVPSWTSTNNKNIDLSYNNFTGAMRSSCQMSTQNLVSSYLPSANEEVSWCLQKDLPCSGNAEYHSLFINCGGRRVEIDGNQYEEDLFSEGRSNFYSVGERWGYSSTGIFMGAEDAPNLAENTFGLNLSGPSFYETARLSPLSLKYYGLCLRKGSYNVKLHFAEIMYSDNQNFSSLGRRIFDVSIQGNLVLKDFNIVEKAGGVGKGYTYENTDVIVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISAITITPNYEVETGGLSAGAIAGIVIASCVLVILVLVVLWLKGYICAKEIVDSELQGLELQTGYFSLRQIKSATGNFDPKNKIGEGGFGPVYKGVLSDGSLIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVRLYGCCIEGHQLLLIYEYMENNSLARALFGAQEHRLHLDWATRKKICMGIAKGLAYLHEESRLKIVHRDIKATNVLLDKNLTAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSNYSKEETMTMLNVALLCTNPSPTLRPPMSSVVRMLEGKIAVQAPLVKRTTEQDARFRAFEKLSQDSQTIVSSISQVSQLHKSMSIDGPWVDSSVSVQSKDETRDHSSSSKLLGSLI 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 56606926 56612207 + Bda021968.1 Bda05g00811 7123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00811 738 PANTHER - 4 70 - -
Bda05g00811 738 PANTHER - 102 719 - -
Bda05g00811 738 Gene3D Ribonuclease Inhibitor 1 115 IPR032675 -
Bda05g00811 738 ProSiteProfiles Protein kinase domain profile. 386 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00811 738 Gene3D - 128 318 - -
Bda05g00811 738 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 102 719 - -
Bda05g00811 738 CDD STKc_IRAK 392 659 - -
Bda05g00811 738 SUPERFAMILY L domain-like 2 102 - -
Bda05g00811 738 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 70 - -
Bda05g00811 738 Gene3D Transferase(Phosphotransferase) domain 1 462 679 - -
Bda05g00811 738 SMART serkin_6 386 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00811 738 SUPERFAMILY Protein kinase-like (PK-like) 369 666 IPR011009 -
Bda05g00811 738 Pfam Malectin domain 131 312 IPR021720 -
Bda05g00811 738 MobiDBLite consensus disorder prediction 717 738 - -
Bda05g00811 738 Pfam Leucine rich repeat 3 63 IPR001611 GO:0005515
Bda05g00811 738 Gene3D Phosphorylase Kinase; domain 1 355 461 - -
Bda05g00811 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Bda05g00811 738 Pfam Protein tyrosine and serine/threonine kinase 389 656 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00811 Bda-Chr5:56606926 Bda12g00813 Bda-Chr12:37532606 0 dispersed
Bda09g00829 Bda-Chr9:18132694 Bda05g00811 Bda-Chr5:56606926 2.72E-32 dispersed
Bda10g00769 Bda-Chr10:42125846 Bda05g00811 Bda-Chr5:56606926 1.99E-21 dispersed
Bda05g00810 Bda-Chr5:56539402 Bda05g00811 Bda-Chr5:56606926 2.01E-18 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69636 PF07714 PK_Tyr_Ser-Thr 7.40E-50 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00811 - - csv:101211151 1100.89