Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00812 ATGACTTCAGGAACGAGGCTACCAACATGGAGGGAAAGGGAAAACAACAAGAGAAGGGAGAGAAGGAGGAGAGCTATAGCGGCGAAGATCTTCACTGGTCTCAGAATGTACGGAAACTATAGGCTTCCGAAGCACTGCGATAACAATGAGGTCCTTAAAGCTCTCTGCGACGAGGCCGGTTGGACCGTTGAATCCGACGGTACCACCTATCGTAAGGGATTTAAACCTGTTGAAAGAATAGATCTTGTTGGCGGGTTGCCAGCGGCAGCCTCCTCATCTCAGCATCACAGTCCATATGCTTCCTTCATTCCGAGCCCCAGTTCTTCCTCTTTTCCTAGTCCAGTCTCATCTTCGTATACTGCTGCTAATCCTACAACGGATGGAAATTCCCTCATCCCTTGGCTTAAAAATCTTTCATCTGCCTCATCATCACCCTCCTCTTCCAAGCGCCCCTACCTCTATATCCACGGAGGCTCTGTCAGTGCTCCAGTTACCCCACCTTTGAGCTCACCAAGTTCCAAAACACCCCGAATTAGAGACAATTGGGAAGAACAAACCACATCCCCTGGTTGGACTGCTCAACAATACTCGATCCTACCATCTTCTGCTCTACCAAGCCCTCCGTCATCTACTCCACCAAGTCCTGGCCGCCAGATTTTTCCGGATCCAGAATGGTTTTCTGGAATTAGAATTCCTTACAGTGGACCGACTTCTCCAACGTTCAGCCTTGTCTCTTCTAACCCATTTGGCTTTAAGGAAGAAGCATTAACTGGTGGTGGATCGCGTATGTGGACTCCCGGGCAAAGTGGGACATGCTCTCCGGCCATTGCAGCAGGCTCTGATCACACTGCTGACATTCCGATGTCTGAACTTATTTCAGATGAGTTTGCATTTGGAAGCAATGCAGCTGGAATAGTTAAGCCCTGGGAAGGAGAGAGGATCCATGAAGATTCTGGATCAGATGATCTCGAGCTGACCCTCGGGAGTTCAAGGACAAGGTTTGATCTCACAACTCCTATTTCAAGGTCTTGA 1032 49.03 MTSGTRLPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYRLPKHCDNNEVLKALCDEAGWTVESDGTTYRKGFKPVERIDLVGGLPAAASSSQHHSPYASFIPSPSSSSFPSPVSSSYTAANPTTDGNSLIPWLKNLSSASSSPSSSKRPYLYIHGGSVSAPVTPPLSSPSSKTPRIRDNWEEQTTSPGWTAQQYSILPSSALPSPPSSTPPSPGRQIFPDPEWFSGIRIPYSGPTSPTFSLVSSNPFGFKEEALTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSELISDEFAFGSNAAGIVKPWEGERIHEDSGSDDLELTLGSSRTRFDLTTPISRS 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 56614124 56617277 - Bda021969.1 Bda05g00812 7124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00812 343 MobiDBLite consensus disorder prediction 163 204 - -
Bda05g00812 343 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 207 - -
Bda05g00812 343 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 208 334 - -
Bda05g00812 343 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 207 IPR033264 GO:0003700|GO:0006351|GO:0009742
Bda05g00812 343 MobiDBLite consensus disorder prediction 1 20 - -
Bda05g00812 343 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Bda05g00812 343 MobiDBLite consensus disorder prediction 205 219 - -
Bda05g00812 343 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 208 334 IPR033264 GO:0003700|GO:0006351|GO:0009742
Bda05g00812 343 MobiDBLite consensus disorder prediction 163 221 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00812 Bda-Chr5:56614124 Bda07g00961 Bda-Chr7:11496069 2.20E-130 dispersed
Bda12g00814 Bda-Chr12:37547736 Bda05g00812 Bda-Chr5:56614124 2.35E-149 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15912 PF05687 BES1_N 3.90E-59 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00812 - - tcc:18594295 485.723