Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00866 ATGAGGAGTAAAATTAAGAGAATAACAGGAGCAGCGAGTGAAAATATCAGCAAGATAATGAAGTTTCTATGCTCAGGAGAGCAATTAAGAAAAGTAGATGAGATGTTTTCTTTGTCTGGCCCCCTTGAAAAAAAGAGTTATTCAGCAAGTGAGAAGGTTTTAGCCACCAGTGAAGGTGGGAAGAAGCTGGATACAGGCAATATCGAAGAAGCCGAATCATCGCTCCGTGAGAGTGGATGTTTGAACTATGAGGAAGCAAGAGCATTATTGGGTCGATACGAGTATCAGAAAGGAAATATTGAATCTGCGTTGCATGTATTCGAAGGAATCGATATTGCTGCAGTGACTCCCAAGATAAAGATTGCCATTGCTAGAAGAGTGGAGAGAATGAGGAGAAGCTCACAAAATTTTTCCACCCCACCAATGTCTATACATGCTGTAAGTTTACTATTGGAAGCCATCTTTCTCAAAGCAAAATCATTGCAGAGCCTTGGGAGGCATAAAGAAGCCGCTCAATGTTGCGAGGTTATTCTCGACACAGTGGAATCTTCACTGCCAAATGGCCTTCCTGAACACTTTGGCACTGACTGTAAATTGCAGGAGACTCTTAACAATGCCGTCGAGTTGCTTCCGGAGCTATGGAAACAGTCCGATTCCCCCTGCAAAGCAATCCTGTCGTACCGACGTGCACTTCTCTACCACTGGAACCTCGATGCAGAAACTACTGCAAGGATTCAAAAGGAGTTTTCCATTTTTCTTCTCTACAGTGATGGCGAAGCAAGCCCTCCAAATCTCAGGTCACAAATGGATAGTTCCTTTGTACCCAAAAACAATATAGAAGAGGCTATACTCCTACTTATGATTTTGTTGAGAAAAGTTACTCTTAAAAGGATTGATTGGGATCCATCAATCTTGGATCATCTCTCATTTGCTTTATCAATATCAGGAGATACTATAGCTTTGGCTAATCTGGTAGAGGAATTGCTTCCTGGTACTCTCAGTCGAAAAGAAATGTATTACACGCTAGCTCTCTGCTATTATGGAGCGGCCGATAACTCGACCGCTTTGAATTTACTGAGGATATTGTTGAGTACAAGTGATGATCCAATTAGTCTTCCAGCTTTACTAATGGCATCAAAGATTTGTACAGAAAGTCAGAATCACGCAGAAGAAGCGCTAAGATTTTCGCATCGAGCAGTTCAAAACTCGGTCGGTGGATGTGATCAGTTGGGAGGTGTTGCCAATTGTTTATTAGGAATTTCACTATCATCTTGCTCAAAATCAGCCACTTCAGATTCCGAAAGGGTTCTCAAACAAGCTGAGGCCCTTCAAGTTCTAGAAAATGCCGGGAAGATGACGAGAATGATTGACCCTCATGTTCTTTACGAGCTGAGTGTTCAAAATGCAGAACAGAGGAAATTAGATTCTGCCCTTTTTTATTCAAAACGCTTGCTTAAATTGGAAGGCGGCTCGAACGTGAAGTCATGGCTCTTACTTGCCAGAATTTTGTCGGCTCAGAAACAATATGTCGAAGGAGAAACTGTAATAAGTGCTGCTTTGGATCAGACCGGGAAATGGGATCAAGGAGAACTACTTCGGACGAAAGCTAAGCTTTTCGTTTTGCAGGGCGAGTTAAAGAGTGCGGTCGAGACTTATTCTCAATTGCTTGCTCTTCTTCAAGTTCAGAGTAAAAGCCTTGGCTTGGGGAAGACGTTTCTTAAGAGCAGTAGAACTTTAGATAGAAGATTGGAGATGGAAGTTTGGCATGATTTAGCTTATCTCTACATAAGTTTGTCTAGATGGGACGATGCTGAGATTTGTCTCGCCAAATCAAGCGCAATCGACTCGTGTTCTGCCAGTCGATGTCATGCCACTGGTATTCTTTATGAAGCAAAAGGCGCCTATAAAGAGGCTCTTAAGTCATTTGCTGATGCTTTGATCATCGATCCTGCACATGTTCCGAGTCTCATTTCTATGGCTTTCGTTTTAAGGCAGCTTGGTCAACATTCACATGCAACGGCCAGAAGTTTTTTGATGGAAGCGCTGCGACTTGATCCGATGAATCATTCTGCATGGCATAACCTAGGCTGTCAACAAATCCGAGGGCTCATCGTTACAAGAGGCAGCTGA 2130 42.77 MRSKIKRITGAASENISKIMKFLCSGEQLRKVDEMFSLSGPLEKKSYSASEKVLATSEGGKKLDTGNIEEAESSLRESGCLNYEEARALLGRYEYQKGNIESALHVFEGIDIAAVTPKIKIAIARRVERMRRSSQNFSTPPMSIHAVSLLLEAIFLKAKSLQSLGRHKEAAQCCEVILDTVESSLPNGLPEHFGTDCKLQETLNNAVELLPELWKQSDSPCKAILSYRRALLYHWNLDAETTARIQKEFSIFLLYSDGEASPPNLRSQMDSSFVPKNNIEEAILLLMILLRKVTLKRIDWDPSILDHLSFALSISGDTIALANLVEELLPGTLSRKEMYYTLALCYYGAADNSTALNLLRILLSTSDDPISLPALLMASKICTESQNHAEEALRFSHRAVQNSVGGCDQLGGVANCLLGISLSSCSKSATSDSERVLKQAEALQVLENAGKMTRMIDPHVLYELSVQNAEQRKLDSALFYSKRLLKLEGGSNVKSWLLLARILSAQKQYVEGETVISAALDQTGKWDQGELLRTKAKLFVLQGELKSAVETYSQLLALLQVQSKSLGLGKTFLKSSRTLDRRLEMEVWHDLAYLYISLSRWDDAEICLAKSSAIDSCSASRCHATGILYEAKGAYKEALKSFADALIIDPAHVPSLISMAFVLRQLGQHSHATARSFLMEALRLDPMNHSAWHNLGCQQIRGLIVTRGS 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 57134533 57137088 + Bda022027.2 Bda05g00866 7178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00866 709 SUPERFAMILY TPR-like 530 698 IPR011990 GO:0005515
Bda05g00866 709 Gene3D Tetratricopeptide repeat domain 27 417 IPR011990 GO:0005515
Bda05g00866 709 SUPERFAMILY TPR-like 151 511 IPR011990 GO:0005515
Bda05g00866 709 Gene3D Tetratricopeptide repeat domain 438 701 IPR011990 GO:0005515
Bda05g00866 709 PANTHER PROTEIN NPG1 11 697 IPR043376 -
Bda05g00866 709 ProSiteProfiles TPR repeat profile. 619 652 IPR019734 GO:0005515
Bda05g00866 709 PANTHER PROTEIN NPGR2 11 697 - -
Bda05g00866 709 SMART tpr_5 493 526 IPR019734 GO:0005515
Bda05g00866 709 SMART tpr_5 585 618 IPR019734 GO:0005515
Bda05g00866 709 SMART tpr_5 151 184 IPR019734 GO:0005515
Bda05g00866 709 SMART tpr_5 529 562 IPR019734 GO:0005515
Bda05g00866 709 SMART tpr_5 619 652 IPR019734 GO:0005515
Bda05g00866 709 SMART tpr_5 653 688 IPR019734 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00866 Bda-Chr5:57134533 Bda09g00603 Bda-Chr9:8754309 0 dispersed
Bda13g00048 Bda-Chr13:681565 Bda05g00866 Bda-Chr5:57134533 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00866 K21843 - jre:108995987 946.036