Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00872 ATGAAGTTGAAAACTCACCAACTGTTGTTCATCTTGTTCTGTTTCATTGGTTTTTTGTCTTCTGGTTCAGCTGTTGTGGATGACGATGAAGCTTTGACTCTCCTTTCAGTAAAAGCAAGTTTAGTTGATTCGTTAAACGTTCTTAAGGATTGGAAGTTGCCAGAAAGCGCCACCGGAAAAGATGGAGTTCACTGCAACTGGACTGGAGTATGGTGCAGCTCAGAAGGAGCCGTTGTGGAGCTTAATCTCTCTCTCATGAACTTGAGCGGAATTATTTCTGATGATTTTCAGAGGCTCAAGAGTTTGACTTCTCTGAACTTGAGTTGTAATGGGTTTTCAACAGCATTGCCCAGCTCCATTTCCAACATCATATCTTTGCAGAGCATTGATCTTAGTCAGAACTCATTTTCTGGCAACTTTCCAGAAGGATTCGGAAGATTATCGTCATTGATTACCTTAAACGCTTCGAGCAATGATTTCTCGGGTTTACTTCCGGGAGATCTTGGAAATGCAACCATGTTAGAGAGTCTTGATCTCAGAGGCAGTTTCTTTGAAGGCTCAGTTCCAACATCTTTCAACAAATTGCAGAAGTTAAAGTTTCTCGGCCTTTCGGGGAATAATTTGACTGGGAAAATCCCGCCGGAGATTGGTCAGATTTCATCACTGGAGAGCATAATTCTTGGTTACAATGAATTTGAAGGTGGGATTCCAGCAGAATTTGGAAATCTCACAAATCTAAAGTACCTTGATTTAGCTGTTGGCAATCTTGGTGGTGAAATTCCACCTCAACTTGGAAATCTCAAACTATTAGAGACAATCTTCTTGTATAAGAACAATTTTGAAGGGAAAATTCCTCCGCAAATCGGCAACATTTCCTCGTTAATATTTCTAGATCTCTCCGCGAATATGCTTTCAGGAGAAATTCCGGCTGAAATTTCTGAGTTGCAGAACTTAAAGCTTTTGAATCTCATGTGCAATCAGCTATCTGGTTCAGTTCCTTCAGCACTTGGAGAATTGACTCAATTGGAGGTTCTTGAGCTGTGGAACAATTCGCTTTCAGGCCAACTGCCAATCAACCTCGGAAAGAACTCTAATTTGATATGGCTGGACGTGTCATCCAATTCGTTTTCAGGTGAAATTCCGGAGACTTTGTGCAACAGAGGCAATCTCACCAAGCTCATCCTCTTCAACAATGCTTTTTCGGGCCATATTCCAATGAGTTTATCGACGTGTTCATCACTCGTACGAGTTAGAATTCAGAACAACCTTCTATCCGGGACAATTCCTCTTGGTCTTGGCAAACTTGGGAAGCTTCAAAGGCTTGAATTAGCTAATAACAGTCTCAACGGAGAAATTCCAGGCGACATTTCTTTTTCGACATCACTTTCTTTCATTGATTTTTCTCAAAACCGTCTCAGTTCTTCGCTTCCTTCAACAATTCTTCTGATCCCAAACCTCCAAACTTTTACAGTGTCAAATAATGATTTCGAAGGTGAAATCCCTGACCAATTCCAGGACTGTCCTTCTCTTTCTGTTCTTAATCTTTCATCAAATCGTCTCTCTGGAAGAATCCCAGAAAGTATTACTTCTTGTGAGAGATTAGTGAACTTGAATCTGAGAAACAACCAGCTAACAGGGGAAATTCCAAGATCACTAGCTAACATGCCCTCTTTGTCTGTTCTTGATCTATCAAACAACTCTCTAACAGGAGGAATCCCTGAAAATTTTGGGATCTCTCCGGCCCTGGAATCGCTCAATGTCTCCTACAACAAGCTGGAGGGGCCTGTACCTTCAAATGGCATCCTCGGGACGATAAACCCAAGCGATCTAGCCGGAAATGCAGGTCTCTGTGGGGCCGTTCTACCTCCATGTTCATCCAATTCTCCATTTTTATCTAACCACACAAGCTCGCATAGAAAGCATGTCATGGCTTTTCTAATCATCGGATTTTCAACGATTTTAACAATTGTGATTGCCCTTTTCGCCGGAAGACACTTTTGCAAACGATGGTATTCAGATGGAGGTTGCTTCGAAGAGAGATATGAAATGAGCAGTGGAGACTGGCCATGGAGATTAATGGCATATCAGAGACTCAGATTCACAAGCTCTGATATTCTGGCCTGCATTAAGGAATCAAATGTTCTAGGAATGGGAGCGACGGGCATCGTTTACAAGGCGGAGATGCCTCATCTTAACACCACTGTAGCAGTCAAGAAGCTATGGAGCTCAGATATGGACATCGAAAATGCTAACAGAGATGATCTGGCGGGAGAGGTGAATCTGCTCGGGAAACTACGCCATAGAAACATCGTTCGATTGCTAGGGTTTATGCATAACGACTCTAAAATCATGATAGTTTACGAATTCATGGAAAATGGCAGCCTCGGAGAAGCTTTACACGGAAAACAAGCGGGGAGATTGCTTCTAGACTGGGTTTCCAGGTATAACATAGCACTAGGAGTTGCGCAAGGGCTTGCTTACCTCCACCATGATTGTCATCCTCCGATCATCCACAGAGATATAAAATCCAATAACATACTTCTAGATTCAAATCTAGAAGCTCGAATTGCCGATTTCGGACTGGCGAGGACGATGGCTAGGAAGAACGAAACTGTATCAATGGTGGCCGGATCATACGGCTACCTTGCTCCAGAATATGGATATACTTTGAAGGTAGACGAGAAGATTGACATATACAGCTATGGGGTCGTTCTGTTAGAGCTGGTGACAGGGAAGAGGCCATTGGAGGCTGAGTTCGGAGAAAACACAGAGATTGTTGAATGGGTAAGAAGGAAAATAAGGGAAAAGAGAAGCTTGGAAGAAGCACTAGACCCCATGATAGGGAATTGCAAGCACGTTCAAGAGGAAATGCTGCTAGTGCTAAGACTAGCTCTCCTATGCACAGCGAAGCTACCGAGAGACAGACCCACCATGAGAGACATCCTAACAATGCTCGCAGAAGCAAAACCCAGAAGAAAAAGCAACACAGCTGGGGATGGGTACGGATCATTGAGCAAGGAGAGGCCTGTTTTCAGCACCTCCCCTGTCCATGGCTTCCCCTAG 3063 43.39 MKLKTHQLLFILFCFIGFLSSGSAVVDDDEALTLLSVKASLVDSLNVLKDWKLPESATGKDGVHCNWTGVWCSSEGAVVELNLSLMNLSGIISDDFQRLKSLTSLNLSCNGFSTALPSSISNIISLQSIDLSQNSFSGNFPEGFGRLSSLITLNASSNDFSGLLPGDLGNATMLESLDLRGSFFEGSVPTSFNKLQKLKFLGLSGNNLTGKIPPEIGQISSLESIILGYNEFEGGIPAEFGNLTNLKYLDLAVGNLGGEIPPQLGNLKLLETIFLYKNNFEGKIPPQIGNISSLIFLDLSANMLSGEIPAEISELQNLKLLNLMCNQLSGSVPSALGELTQLEVLELWNNSLSGQLPINLGKNSNLIWLDVSSNSFSGEIPETLCNRGNLTKLILFNNAFSGHIPMSLSTCSSLVRVRIQNNLLSGTIPLGLGKLGKLQRLELANNSLNGEIPGDISFSTSLSFIDFSQNRLSSSLPSTILLIPNLQTFTVSNNDFEGEIPDQFQDCPSLSVLNLSSNRLSGRIPESITSCERLVNLNLRNNQLTGEIPRSLANMPSLSVLDLSNNSLTGGIPENFGISPALESLNVSYNKLEGPVPSNGILGTINPSDLAGNAGLCGAVLPPCSSNSPFLSNHTSSHRKHVMAFLIIGFSTILTIVIALFAGRHFCKRWYSDGGCFEERYEMSSGDWPWRLMAYQRLRFTSSDILACIKESNVLGMGATGIVYKAEMPHLNTTVAVKKLWSSDMDIENANRDDLAGEVNLLGKLRHRNIVRLLGFMHNDSKIMIVYEFMENGSLGEALHGKQAGRLLLDWVSRYNIALGVAQGLAYLHHDCHPPIIHRDIKSNNILLDSNLEARIADFGLARTMARKNETVSMVAGSYGYLAPEYGYTLKVDEKIDIYSYGVVLLELVTGKRPLEAEFGENTEIVEWVRRKIREKRSLEEALDPMIGNCKHVQEEMLLVLRLALLCTAKLPRDRPTMRDILTMLAEAKPRRKSNTAGDGYGSLSKERPVFSTSPVHGFP 1020
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 57171543 57174688 - Bda022033.1 Bda05g00872 7184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00872 1020 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
Bda05g00872 1020 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
Bda05g00872 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Bda05g00872 1020 Gene3D Transferase(Phosphotransferase) domain 1 794 1001 - -
Bda05g00872 1020 PRINTS Leucine-rich repeat signature 510 523 - -
Bda05g00872 1020 PRINTS Leucine-rich repeat signature 555 568 - -
Bda05g00872 1020 Gene3D Ribonuclease Inhibitor 187 253 IPR032675 -
Bda05g00872 1020 ProSiteProfiles Protein kinase domain profile. 709 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00872 1020 SUPERFAMILY Protein kinase-like (PK-like) 705 985 IPR011009 -
Bda05g00872 1020 SUPERFAMILY RNI-like 260 597 - -
Bda05g00872 1020 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 999 - -
Bda05g00872 1020 Gene3D Ribonuclease Inhibitor 254 360 IPR032675 -
Bda05g00872 1020 Gene3D Phosphorylase Kinase; domain 1 709 793 - -
Bda05g00872 1020 Gene3D Ribonuclease Inhibitor 375 628 IPR032675 -
Bda05g00872 1020 Pfam Protein kinase domain 711 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00872 1020 PANTHER UNNAMED PRODUCT 10 999 - -
Bda05g00872 1020 Pfam Leucine rich repeat 484 544 IPR001611 GO:0005515
Bda05g00872 1020 SMART serkin_6 709 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00872 1020 Pfam Leucine Rich Repeat 558 576 IPR001611 GO:0005515
Bda05g00872 1020 SMART LRR_typ_2 195 219 IPR003591 -
Bda05g00872 1020 SMART LRR_typ_2 435 459 IPR003591 -
Bda05g00872 1020 SMART LRR_typ_2 147 170 IPR003591 -
Bda05g00872 1020 SMART LRR_typ_2 315 338 IPR003591 -
Bda05g00872 1020 SMART LRR_typ_2 243 267 IPR003591 -
Bda05g00872 1020 SMART LRR_typ_2 339 363 IPR003591 -
Bda05g00872 1020 SMART LRR_typ_2 507 531 IPR003591 -
Bda05g00872 1020 SMART LRR_typ_2 99 123 IPR003591 -
Bda05g00872 1020 SMART LRR_typ_2 555 579 IPR003591 -
Bda05g00872 1020 ProSitePatterns Protein kinases ATP-binding region signature. 715 739 IPR017441 GO:0005524
Bda05g00872 1020 SUPERFAMILY L domain-like 64 310 - -
Bda05g00872 1020 MobiDBLite consensus disorder prediction 992 1020 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00872 Bda-Chr5:57171543 Bda07g01792 Bda-Chr7:33892355 0 dispersed
Bda07g00926 Bda-Chr7:10867299 Bda05g00872 Bda-Chr5:57171543 1.08E-27 dispersed
Bda13g00308 Bda-Chr13:3922451 Bda05g00872 Bda-Chr5:57171543 3.63E-06 dispersed
Bda13g01453 Bda-Chr13:37251958 Bda05g00872 Bda-Chr5:57171543 0 dispersed
Bda14g00469 Bda-Chr14:3377425 Bda05g00872 Bda-Chr5:57171543 7.43E-66 dispersed
Bda15g00291 Bda-Chr15:5668759 Bda05g00872 Bda-Chr5:57171543 5.53E-134 dispersed
Bda01g01082 Bda-Chr1:45547660 Bda05g00872 Bda-Chr5:57171543 1.08E-36 transposed
Bda01g01603 Bda-Chr1:51886698 Bda05g00872 Bda-Chr5:57171543 7.33E-16 transposed
Bda01g02040 Bda-Chr1:56668240 Bda05g00872 Bda-Chr5:57171543 3.54E-28 transposed
Bda03g00601 Bda-Chr3:4985259 Bda05g00872 Bda-Chr5:57171543 1.82E-06 transposed
Bda11g00825 Bda-Chr11:8177889 Bda05g00872 Bda-Chr5:57171543 3.54E-164 transposed
Bda12g00350 Bda-Chr12:4028559 Bda05g00872 Bda-Chr5:57171543 0 transposed
Bda11g00657 Bda-Chr11:6504448 Bda05g00872 Bda-Chr5:57171543 0 wgd
Bda03g01111 Bda-Chr3:11359984 Bda05g00872 Bda-Chr5:57171543 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69638 PF00069 Pkinase 4.20E-50 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00872 - - zju:112489211 1470.68