Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00891 ATGGGTGGTGAAGGTGGCAAGATATACAGTTTGAGTGAGGTAGCCTCCCACAACTCTAAAAACGACTGCTGGATTCTCGTCGAGGGCAAGGTGTACGATGTGACGAAGTTTTTGGACGATCATCCCGGCGGGGACGAGGTAGTGTTGTTAGCCACAGGAAAGGACGCAAGTGATGACTTTGCGGATGTGGGACACGGAAGCACAGCCTATGCGATGATGACTGATTACTACGTCGGAGACATCGACATATCGTCCATTCCGGCGAAGGTTAAGAGCATTCCTTCGGCCTTGCCGCCTCTCGAAAAGCAGGGCCCGGCTGAAAGGCAGCATCGCATTTTGAAGCTCCTCCTCCAATATCTACTTCCTCTCATTATTTTGGGACTGGCTTTGGGAGTTGGCTTCTATACTAAGAGTAGAGAATAA 423 50.35 MGGEGGKIYSLSEVASHNSKNDCWILVEGKVYDVTKFLDDHPGGDEVVLLATGKDASDDFADVGHGSTAYAMMTDYYVGDIDISSIPAKVKSIPSALPPLEKQGPAERQHRILKLLLQYLLPLIILGLALGVGFYTKSRE 140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 57337444 57338461 - Bda022052.1 Bda05g00891 7203

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00891 140 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 37 44 IPR018506 GO:0020037
Bda05g00891 140 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 6 82 IPR001199 -
Bda05g00891 140 PRINTS Cytochrome B5 signature 31 41 IPR001199 -
Bda05g00891 140 PRINTS Cytochrome B5 signature 69 81 IPR001199 -
Bda05g00891 140 PRINTS Cytochrome B5 signature 56 63 IPR001199 -
Bda05g00891 140 PRINTS Cytochrome B5 signature 41 55 IPR001199 -
Bda05g00891 140 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 81 IPR001199 -
Bda05g00891 140 Gene3D - 4 84 IPR036400 -
Bda05g00891 140 PANTHER CYTOCHROME B5 1 137 - -
Bda05g00891 140 SMART Cyt_b5_2 9 82 IPR001199 -
Bda05g00891 140 PANTHER - 1 137 - -
Bda05g00891 140 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 7 89 IPR036400 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00891 K23490 CYB5; cytochrome b5 - cit:102616688 159.073
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00891 Bda-Chr5:57337444 Bda11g00353 Bda-Chr11:3925250 3.43E-50 dispersed
Bda05g00891 Bda-Chr5:57337444 Bda13g00491 Bda-Chr13:5773805 2.54E-53 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda07g01952 . 1 134 NADPH P450 reductases AT5G53560 81.3 5.4e-61 230.3
Bda11g00353 . 4 137 NADPH P450 reductases AT5G53560 70.1 5.4e-53 203.8
Bda13g00491 . 1 134 NADPH P450 reductases AT5G53560 68.7 7.9e-52 199.9
Bda13g00400 . 7 143 NADPH P450 reductases AT5G53560 54.0 5.8e-39 157.1
Bda11g00353 . 4 137 NADPH P450 reductases AT5G48810 64.0 7.7e-50 193.4
Bda13g00491 . 1 134 NADPH P450 reductases AT5G48810 62.5 3.8e-49 191.0
Bda07g01952 . 1 134 NADPH P450 reductases AT5G48810 60.3 2.0e-45 178.7
Bda05g00891 . 1 139 NADPH P450 reductases AT5G48810 56.1 1.7e-41 165.6
Bda13g00491 . 22 133 NADPH P450 reductases AT2G32720 82.1 9.6e-50 193.0
Bda11g00353 . 25 136 NADPH P450 reductases AT2G32720 80.4 3.7e-49 191.0
Bda07g01952 . 22 133 NADPH P450 reductases AT2G32720 66.1 3.4e-39 157.9
Bda05g00993 BCT 2 281 NADPH P450 reductases AT5G17770 81.1 2.5e-132 468.4
Bda03g01493 BCT 2 253 NADPH P450 reductases AT5G17770 80.2 1.1e-116 416.4
Bda09g01304 . 7 325 NADPH P450 reductases AT5G17770 63.3 5.9e-110 394.0
Bda07g01952 . 1 134 NADPH P450 reductases AT5G53560 81.3 5.4e-61 230.3
Bda11g00353 . 4 137 NADPH P450 reductases AT5G53560 70.1 5.4e-53 203.8
Bda13g00491 . 1 134 NADPH P450 reductases AT5G53560 68.7 7.9e-52 199.9
Bda13g00400 . 7 143 NADPH P450 reductases AT5G53560 54.0 5.8e-39 157.1
Bda11g00353 . 4 137 NADPH P450 reductases AT5G48810 64.0 7.7e-50 193.4
Bda13g00491 . 1 134 NADPH P450 reductases AT5G48810 62.5 3.8e-49 191.0
Bda07g01952 . 1 134 NADPH P450 reductases AT5G48810 60.3 2.0e-45 178.7
Bda05g00891 . 1 139 NADPH P450 reductases AT5G48810 56.1 1.7e-41 165.6
Bda13g00491 . 22 133 NADPH P450 reductases AT2G32720 82.1 9.6e-50 193.0
Bda11g00353 . 25 136 NADPH P450 reductases AT2G32720 80.4 3.7e-49 191.0
Bda07g01952 . 22 133 NADPH P450 reductases AT2G32720 66.1 3.4e-39 157.9
Bda05g00993 BCT 2 281 NADPH P450 reductases AT5G17770 81.1 2.5e-132 468.4
Bda03g01493 BCT 2 253 NADPH P450 reductases AT5G17770 80.2 1.1e-116 416.4
Bda09g01304 . 7 325 NADPH P450 reductases AT5G17770 63.3 5.9e-110 394.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0021203 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3