Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00903 ATGATTTTATTGACATCCTTGACTGTTACAAAGGTCTTGAAGAGAGACATTCCATGGGAGACATACATGACAACTAAACTAATCAGTGGAACAAGCCTTCAGCTTTTAAGACGTTACGATAACAAACCAGAAAGTTACAGAGCACAATTGCTGGAAGATGATGGTCCAGCTTATGTTCGAGTTTTTGTTAGCATTTTACGTGATATATATAAGGAGGAAACAGTGGAATATGTTCTGGCATTACTAGATGAAATGCTTACTGCAAATCCAAAAAGAGCAAGATTGTTCCATGACAAGTCTCTTGCCATGGAAGATACCTATGAACCATTCCTTAGGTTGCTTTGGAAAGGTAATTTGTTCATACAGGAGAAAAGCTGCAAAATACTTGCTCTGATAGTGAGCACAAGACCAAAAACCCATGATGGCGGAGATGCCTCGTTTTCAAAGAAATCGTTCACCACTATTGATGATGTGTTGAAAGGACTAGTAGAATGGCTTTGTGCACAGCTGAAGAAGTCATCCTATCCTAGTCGTGGTATCCCAGTTGCTGTCAACTGCCTTGCAACTTTACTTAAAGAACCTGTGATCCGAACTTCTTTTCTTCAAGCAGACGGAGTGACTTTGCTTGTTCCTTTAATTACTCCGGCATCCACTCAACAGTCTATTCAGCTTCTCTACGAAACATGTCTTTGTATCTGGCTCTTGTCCTACCATGAGCCTGCCATTGAATTCTTAGCCACTTCTAGAACTCTGCCAAGACTAGTGGAAGTTGCCAAGAGTTCCACAAAGGAGAAGGTTGTTCGGGTGGTTGTTTTGACTCTAAAGAACTTGCTCTCGAAAGGGACATTTGGTGCTGAAATGGTTGATCTTGGTCTACCGCTGATTGTGCAGAGCTTGAAAACTCAAGCTTGGAGTGATGAGGATCTGTTGGAGGCTTTGAACCAACTGGATGAGGGACTAAAGGACAATATCAAGAGACTTAGTTCTTTTGATAAATACAAGCAAGAAGTCCTCCGTGGTCGTCTTGATTGGACTCCTATGCACAAGGATCTTACATTCTGGCGTGAGAATATAATGAATTTTGAAGAGAACGATTTTCAGATTCTAAGAGTCCTCCTAACTATTTTGAACACATCAAACGATCCGAGAACTCTGGCAGTGGCTTGCTATGATCTTTCGCAGTTCATTCAACACCATCCAGCTGGGAGAGTGATAGTAAATGACCTCAAGGCTAAGGAAAGGGTAATGAGATTGATGAGCCACGAAAATGCTGAGGTCACCAAAAATGCTCTCCTCTGCATCCAGAGGCTCTTCCTGGGTGCCAAGTATGCTAGCTTTTTGCAGGTT 1347 42.02 MILLTSLTVTKVLKRDIPWETYMTTKLISGTSLQLLRRYDNKPESYRAQLLEDDGPAYVRVFVSILRDIYKEETVEYVLALLDEMLTANPKRARLFHDKSLAMEDTYEPFLRLLWKGNLFIQEKSCKILALIVSTRPKTHDGGDASFSKKSFTTIDDVLKGLVEWLCAQLKKSSYPSRGIPVAVNCLATLLKEPVIRTSFLQADGVTLLVPLITPASTQQSIQLLYETCLCIWLLSYHEPAIEFLATSRTLPRLVEVAKSSTKEKVVRVVVLTLKNLLSKGTFGAEMVDLGLPLIVQSLKTQAWSDEDLLEALNQLDEGLKDNIKRLSSFDKYKQEVLRGRLDWTPMHKDLTFWRENIMNFEENDFQILRVLLTILNTSNDPRTLAVACYDLSQFIQHHPAGRVIVNDLKAKERVMRLMSHENAEVTKNALLCIQRLFLGAKYASFLQV 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 57432525 57438696 + Bda033660 Bda05g00903 7215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00903 449 Pfam V-ATPase subunit H 327 438 IPR011987 GO:0000221|GO:1902600
Bda05g00903 449 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 6 449 - -
Bda05g00903 449 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 395 402 IPR018506 GO:0020037
Bda05g00903 449 Gene3D - 341 441 IPR038497 -
Bda05g00903 449 SMART arm_5 192 237 IPR000225 GO:0005515
Bda05g00903 449 SMART arm_5 238 279 IPR000225 GO:0005515
Bda05g00903 449 SMART arm_5 399 439 IPR000225 GO:0005515
Bda05g00903 449 Gene3D - 3 328 IPR011989 -
Bda05g00903 449 SUPERFAMILY ARM repeat 9 439 IPR016024 -
Bda05g00903 449 PIRSF V-ATP_synth_H 4 448 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bda05g00903 449 Pfam V-ATPase subunit H 10 320 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bda05g00903 449 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 6 449 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00903 Bda-Chr5:57432525 Bda05g00910 Bda-Chr5:57643466 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00903 K02144 - tcc:18599585 761.14