Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00905 ATGAGTTGCAGCGAGAGCGGCGGAGGAATACAAGAGAGAGAACAAGCACATGTGGTTTTGCGGAGGTCTGTTGACTTAGAACGAAAATCTCTCTCCCGTAATGGATTGGTGACAGCCACGCAGACAACAATTGATGAGAATCTTCTTGTCGACCCCAAATTACTGTTTATTGGATCTAAGGTTGGTGAGGGAGCTCATGGAAAAGTTTATGAAGGAAGGTATGGGAATCAAATAGTTGCAATCAAAGTTCTCAATCGTGGGAATACAGCCGAGGAAAGAGCTTCTCTTGAAAATCGTTTCATTCGAGAAGTAAATATGATGACTCGTGTTAAACATGATAATCTGGTCAAATTTATTGGAGCATGTAAAGATCCTTTAATGGTTATCGTGACGGAGCTCTTACCAGGAATGTCTTTGCGAAAGTATCTACTGGCTATTCGACCAGAGCTGTTAGACCTTGATGTGGCTATTAGATATGCACTAGATATTGCTCGCGCTATGGAGTGTCTGCATGCAAATGGGATCATCCATAGAGATCTAAAACCTGATAATTTGTTGCTTACGACCAATCACAGGTCCGTAAAGCTCGCAGACTTTGGCCTTGCAAGAGAAGAATCTGTGACAGAGATGATGACTGCAGAGACTGGGACTTATCGGTGGATGGCTCCCGAGTTATACAGTACAGTGACATTGCGTCAGGGAGAAAAGAAACATTACAATAACAAGGTAGATGTATACAGCTTTGGAATTGTCTTATGGGAACTCGTGACCAACCGCATGCCGTTTGAAGGCATGTCGAATTTGCAGGCCGCGTATGCTGCTGCATTTAAGCAGGAGAGGCCTAATCTTCCGGAGGACATGTCTGCTGATCTGGCATTCATCATACAATCATGTTGGGTCGAGGATTCTAACTCGAGGCCCAGCTTCGGCCAAATCATTCGCATGCTCAACGCATTTCTATTTACTCTCCCTCCCCCTTCGCCGTCAGCCGTCCCAGAATCAAACACCAGCGAGGCACCAACAAGCAACGTTGCCATGACCGAGTTATCTGGTCGCATGCGAGGGAAGTTTGGTTTTCTCCGCCAACTGTTTGCCGCAAAGAAGGGTAAGAACTCGGAA 1119 45.67 MSCSESGGGIQEREQAHVVLRRSVDLERKSLSRNGLVTATQTTIDENLLVDPKLLFIGSKVGEGAHGKVYEGRYGNQIVAIKVLNRGNTAEERASLENRFIREVNMMTRVKHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLLAIRPELLDLDVAIRYALDIARAMECLHANGIIHRDLKPDNLLLTTNHRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELVTNRMPFEGMSNLQAAYAAAFKQERPNLPEDMSADLAFIIQSCWVEDSNSRPSFGQIIRMLNAFLFTLPPPSPSAVPESNTSEAPTSNVAMTELSGRMRGKFGFLRQLFAAKKGKNSE 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 57553100 57555567 - Bda033662 Bda05g00905 7217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00905 373 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00905 373 PANTHER SERINE-THREONINE PROTEIN KINASE 22 350 - -
Bda05g00905 373 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Bda05g00905 373 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 22 350 - -
Bda05g00905 373 SUPERFAMILY Protein kinase-like (PK-like) 54 340 IPR011009 -
Bda05g00905 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Bda05g00905 373 CDD STKc_MAP3K-like 61 316 - -
Bda05g00905 373 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Bda05g00905 373 Gene3D Transferase(Phosphotransferase) domain 1 139 342 - -
Bda05g00905 373 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Bda05g00905 373 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00905 Bda-Chr5:57553100 Bda09g01013 Bda-Chr9:40133049 4.96E-77 dispersed
Bda14g01176 Bda-Chr14:11240606 Bda05g00905 Bda-Chr5:57553100 1.99E-153 transposed
Bda13g00006 Bda-Chr13:49226 Bda05g00905 Bda-Chr5:57553100 2.68E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69639 PF07714 PK_Tyr_Ser-Thr 7.40E-59 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00905 - - pvy:116122941 604.364