Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00930 GCTGCCGCTGCCGCTGCTACTTCCTCCTTCATCGGAACTCGCCTCCCCGACGTCCGACCCAACACGGGCCGGGTCCAAGCTCGATTCGGGTTCGGACGCAAAAAGAGCGCGCCAAAGAAAGTGACGAAGCGCGTTTCGGACCGCCCGCTTTGGTACCCGGGAGCAGTAGCACCCGAATGGCTCGACGGCAGCTTGGTTGGTGATTATGGGTTCGACCCGTTTAACTTGGGAAAGCCAGCCGAGTACTTGCAGTTCGATCTGGATTCATTGGACCAGAATCTGGCGAAGAATGCGGCCGGGGACATTATCGGAACCCGGTTCGAGAGCGGGGATGTGAAGTCGACTCCATTCCAGCCGTACTCGGAGGTTTTTGGGTTACAGAGGTTTCGTGAATGCGAGCTGATCCACGGGAGGTGGGCTATGTTGGCTACTCTCGGCGCCCTCTCCGTCGAGTGGCTCACCGGAGTTACCTGGCAAGATGCCGGAAAGGTAGAGCTGGTGGAAGGTTCATCTTACCTTGGGCTACCACTTCCATTTTCGATGTCAACATTGATATGGATCGAAGTGCTCGTAATTGGATACATAGAGTTTCAGAGAAATGCAGAGCTTGACCCAGAGAAAAGGCTATATCCTGGAGGGAAATATTTCGACCCGCTCGGCTTGGCGTCGGACCCGGAGAAAAAGGCCACTCTGCAACTGGCTGAAATCAAGCACGCTCGGCTAGCCATGCTGGGTTTCCTTGGTTTTGCAGTCCAAGCTGCTGCGACGGGTAAAGGTCCTCTCAACAACTGGGCAACTCACTTGAGTGACCCTCTTCACACAACCATTATCGACACTTTTACCTCC 846 55.08 AAAAAATSSFIGTRLPDVRPNTGRVQARFGFGRKKSAPKKVTKRVSDRPLWYPGAVAPEWLDGSLVGDYGFDPFNLGKPAEYLQFDLDSLDQNLAKNAAGDIIGTRFESGDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGLPLPFSMSTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLASDPEKKATLQLAEIKHARLAMLGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFTS 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 57875719 57876649 - Bda033668 Bda05g00930 7242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00930 282 Gene3D Chlorophyll a/b binding protein domain 51 282 - -
Bda05g00930 282 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 279 IPR001344 GO:0009765|GO:0016020
Bda05g00930 282 Pfam Chlorophyll A-B binding protein 57 253 IPR022796 -
Bda05g00930 282 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 3 279 - -
Bda05g00930 282 SUPERFAMILY Chlorophyll a-b binding protein 42 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00930 Bda-Chr5:57875719 Bda15g00170 Bda-Chr15:4252509 5.89E-44 dispersed
Bda07g01019 Bda-Chr7:12003057 Bda05g00930 Bda-Chr5:57875719 0 transposed
Bda01g00152 Bda-Chr1:22301994 Bda05g00930 Bda-Chr5:57875719 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00930 K08915 - egr:104426378 521.161