Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00933 ATGGGTTCTGGTTGCCTGAGAAAGCTAAGTTTTTGGAGCAGAAAAAATGGCGCAATCGAAGAACAGGTAGAAGGGATTGTTGCCAACAATGTAAAGCTGTTTTCTTACAACTCATTGAGATCGGCCACCGGAGATTTTCATCCGTCGAGCAGAATAGGTCGAGGAGGCTATGGAATTGTATACAAAGGAGTTCTTAGAGATGGTACTCAAGTAGCCATTAAATCCCTCTCCGCCCAATCGAAGCAAGGGTACCGGGAATTTTTGACGGAAATAAACATGATTTCCAACATTCGACATCCAAACCTCGTTCAATTGATCGGCTGTTGCGTCGAAGACAGATACCGGATATTGGTCTACGAATATTTGGAGAACAACAGCCTTGCAAGTGTCTTGCTCGATTCGAAAATTAATCGAGTTGCTCTGGATTGGCGTAAGAGAGCTGGAATTTGCAAGGGAACAGCCGCTGCCCTTGCATTTCTCCACGAAGAAGCCGACCCAAATATCGTCCATAGAGATATTAAGGCTAGCAATGTTCTTCTGGATGGAGCCTTTTGTCCGAAATTAGGCGATTTTGGGCTGGCCAAGCTTTTTCCCGACAATGTCACGCATGTTAGCACTCGAGTCGCCGGAACTGTTGGATATCTGGCTCCAGAGTATGCACTTCTAGGACAGCTTACCAAGAAGGCTGATGTGTATAGTTTTGGAGTGCTCTTGCTGGAAATAATCAGTGGCAGAAGCAGCAGCAAGGCAGCGTTTGGAGATGAGCATCTGCTTCTAGTGGAATGGGCTTGGAAACTGAGAGGAGACGAGAGGCTAGCCGAAATCGTGGACAAAGAACTGGTGGAATATCCGAAATCGGAGGCGATTCGGTTCATCAAGGTGGGTCTCTTCTGCACTCAAGCTGCTGCCAACCAAAGGCCGACCATGAAGCAAGTTGTGGAAATGCTGGAAAAACAAGTCAGTCTTAACGAAAGGGTTCTGACAGAGCCGGGTGTTTTGAGGTCAAACCCTTCCCGTTCTGGTAGGCGGACTATTTCAGGCGGGGCATCATTTTCCGATGAACATAAATGTAGGCCACCACTAGTGAATCATTCGTTAAATTCAATGCCGCGTAGTGGCTTTCAATTTGTGACAGAGATGCTTCCTAGATGA 1152 46.79 MGSGCLRKLSFWSRKNGAIEEQVEGIVANNVKLFSYNSLRSATGDFHPSSRIGRGGYGIVYKGVLRDGTQVAIKSLSAQSKQGYREFLTEINMISNIRHPNLVQLIGCCVEDRYRILVYEYLENNSLASVLLDSKINRVALDWRKRAGICKGTAAALAFLHEEADPNIVHRDIKASNVLLDGAFCPKLGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDEHLLLVEWAWKLRGDERLAEIVDKELVEYPKSEAIRFIKVGLFCTQAAANQRPTMKQVVEMLEKQVSLNERVLTEPGVLRSNPSRSGRRTISGGASFSDEHKCRPPLVNHSLNSMPRSGFQFVTEMLPR 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 57893860 57895491 + Bda022087.1 Bda05g00933 7245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00933 383 SUPERFAMILY Protein kinase-like (PK-like) 24 317 IPR011009 -
Bda05g00933 383 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 19 346 - -
Bda05g00933 383 MobiDBLite consensus disorder prediction 331 364 - -
Bda05g00933 383 MobiDBLite consensus disorder prediction 333 347 - -
Bda05g00933 383 Pfam Protein tyrosine and serine/threonine kinase 50 316 IPR001245 GO:0004672|GO:0006468
Bda05g00933 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Bda05g00933 383 Gene3D Transferase(Phosphotransferase) domain 1 122 328 - -
Bda05g00933 383 SMART serkin_6 46 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00933 383 CDD STKc_IRAK 52 318 - -
Bda05g00933 383 Gene3D Phosphorylase Kinase; domain 1 17 121 - -
Bda05g00933 383 ProSiteProfiles Protein kinase domain profile. 46 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00933 383 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Bda05g00933 383 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00933 Bda-Chr5:57893860 Bda12g00776 Bda-Chr12:36466749 2.29E-113 dispersed
Bda09g00751 Bda-Chr9:13213789 Bda05g00933 Bda-Chr5:57893860 1.82E-39 dispersed
Bda05g00933 Bda-Chr5:57893860 Bda12g00813 Bda-Chr12:37532606 1.11E-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69641 PF07714 PK_Tyr_Ser-Thr 5.50E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00933 - - cpap:110807720 516.538