Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00942 ATGCTTGCGTCCATGGACTTAAATGCTTCTCCAGTACCTGAAGAGGACGAGGAAAATTATGAGAGGCGTGCAGAAGAATATAGTGCGCCGGAAGACCGGGTAGAAACTGCAGTTGATATAGCACGCAGGGAGCGAGACGAAAGACGTAAAAAGTTAAAACGAGAACGCCCAGATGAGAAACCAATGCATGTATCTCAACCATATGTTTATGATTCGTTTTATCCAATGAAAAGCCTGAAGTCTCATGATAGAAACAGACTTCCTCCAGGGTGGTTGGATTGTCCTCCATATGGTAGTGAAATATCTTTCATTATTCCTTCTAAGGTTCCACTTGATGATACTTTCAATGACCAGATAGCTCCGGGTAAAAGATACTCCTTTAAGCAAGTGATTCATCAACAAAGACTTGGTTTGGTGATAGATCTGACAAATACTTCTCGTTACTACACAACAGTAGACTTGAAGAAAGAGGGTATCAAGCATGTTAAGATCCCATGCAAAGGAAGGGATTCCGTACCTGACAATGCCTCAGTTAATCAATTTGTCTATGAGGTCATTCAATTTTTTTTCCGCCAAAAACAGTCAAAGAAGTATATCCTTGTACATTGCACTCATGGGCATAATCGAACAGGATATATGATTATTCATTATCTTATGCGCTCTATGTCTATTTCTGTCACTCAGGCAATAAAAGTATTTTCTGATGCTCGCCCTCCTGGAATCTACAAGCCTGACTATATAGATGCGCTGTATGCCTTTTATCATGAAAGAAAGCCCGAAATAGTTGTCTGTCCCCAAACACCTGAGTGGAAAAGATCCTCTGAGCTTGATCTTAATGGTGAAGCATTGCCAGACGATGATGATGATGGAGTTTCTGCTGCTCCTTTTCATGATAATGATGACCATGTGGTGATGACGAACGATGATGTTTTGGGAGATGAAATACCTAGGGAGCAACAAGATGCCTTTCGACTCTTCTGCTATCAAATGCTTAAGTTGGGTGTTGGGGCAAGAGGAAATTCTCAGTTTCCTGGGTCACACCCAGTTTCTCTCAACAGGGATAATTTACAATTGTTAAGGCAGCGTTATTATTATGCCACATGGAAAGCTGATGGAACGCGATATATGATGCTAATTACTATGGATGGGTGTTACTTGGTTGATAGGAATTTCAATTTCCGCAGGGTGCAAATGAGGTTTCCCTGCAGAAACATGAATGATGGTCTTGTAGAGAGGGCTCATCATTATACATTGCTTGATGGGGAGATGATAATTGATACTGTGCCAGGCACACAGAAGCAAGAGAGAAGATATCTCATCTATGATCTCATGGCAATTAACAACATCTCTGTTATTGAGCGACCTTTCTATGAAAGATGGAAAATGCTCGAGAAGGAAGTAATTGAACCTCGTAACTCTGAGCGCCAGAAGATTTACCATTACAGATATGATCTGGAGCCATTCAGGGTAAGGAGGAAAGATTTTTGGTTGCTCTCTGCTGTTAATAAGGTTCTAAAGGAATTCATTCCGAAGCTTTCACATGAAGCGGATGGACTAATTTTCCAGGGTTGGGATGATCCCTATATTCCTCGCACACACGAAGGCCTTTTGAAATGGAAGTATGCCCAATTGAACTCCGTTGACTTCCTATTCGAGATGGTTGACGATGAGAACCAGCATCTTTTTCTCTATGAACGAGGAAAGAAGAAACTTATGGAAGGAAATAGAGTTGTATTTAGAGATGGTTCAGATCCCTCTTTTTATTCTGGGAAGATAATAGAGTGCACTTGGGATTCTGACCAACAGCAATGGGACTGTATGAGAATCAGGACTGATAAATCAACTCCAAATGATTTCAATACATATAAAAAGGTGATGCGAAGCATAAGAGACAATATCACTGAGGATATCTTGTTGAATGAGATTGATGAGATTATTCGTCTGCCCATGTATGCTGACAGGATAAAGATTGATAGTAAAGCACACCAGCACATAAATCGACGGAGATGA 2010 40.75 MLASMDLNASPVPEEDEENYERRAEEYSAPEDRVETAVDIARRERDERRKKLKRERPDEKPMHVSQPYVYDSFYPMKSLKSHDRNRLPPGWLDCPPYGSEISFIIPSKVPLDDTFNDQIAPGKRYSFKQVIHQQRLGLVIDLTNTSRYYTTVDLKKEGIKHVKIPCKGRDSVPDNASVNQFVYEVIQFFFRQKQSKKYILVHCTHGHNRTGYMIIHYLMRSMSISVTQAIKVFSDARPPGIYKPDYIDALYAFYHERKPEIVVCPQTPEWKRSSELDLNGEALPDDDDDGVSAAPFHDNDDHVVMTNDDVLGDEIPREQQDAFRLFCYQMLKLGVGARGNSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLVDRNFNFRRVQMRFPCRNMNDGLVERAHHYTLLDGEMIIDTVPGTQKQERRYLIYDLMAINNISVIERPFYERWKMLEKEVIEPRNSERQKIYHYRYDLEPFRVRRKDFWLLSAVNKVLKEFIPKLSHEADGLIFQGWDDPYIPRTHEGLLKWKYAQLNSVDFLFEMVDDENQHLFLYERGKKKLMEGNRVVFRDGSDPSFYSGKIIECTWDSDQQQWDCMRIRTDKSTPNDFNTYKKVMRSIRDNITEDILLNEIDEIIRLPMYADRIKIDSKAHQHINRRR 669
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 57946444 57953411 - Bda022096.1 Bda05g00942 7254
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00942 669 MobiDBLite consensus disorder prediction 1 62 - -
Bda05g00942 669 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 179 248 IPR000387 GO:0016311|GO:0016791
Bda05g00942 669 Gene3D Protein tyrosine phosphatase superfamily 83 290 IPR029021 -
Bda05g00942 669 Pfam mRNA capping enzyme, catalytic domain 347 540 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bda05g00942 669 CDD Adenylation_mRNA_capping 318 541 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bda05g00942 669 ProSiteProfiles ATP-dependent DNA ligase family profile. 438 569 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bda05g00942 669 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 307 541 - -
Bda05g00942 669 Gene3D - 580 648 IPR012340 -
Bda05g00942 669 Pfam mRNA capping enzyme, C-terminal domain 545 638 IPR013846 -
Bda05g00942 669 CDD RNA_5'-triphosphatase 90 251 - -
Bda05g00942 669 PANTHER MRNA-CAPPING ENZYME 3 668 - -
Bda05g00942 669 Gene3D DNA ligase/mRNA capping enzyme 299 540 - -
Bda05g00942 669 ProSiteProfiles Dual specificity protein phosphatase domain profile. 100 260 IPR020422 GO:0006470|GO:0008138
Bda05g00942 669 ProSitePatterns Tyrosine specific protein phosphatases active site. 201 211 IPR016130 GO:0016311|GO:0016791
Bda05g00942 669 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 668 - -
Bda05g00942 669 Pfam Dual specificity phosphatase, catalytic domain 128 254 IPR000340 GO:0008138|GO:0016311
Bda05g00942 669 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 87 271 IPR029021 -
Bda05g00942 669 SMART dsp_5 109 256 IPR020422 GO:0006470|GO:0008138
Bda05g00942 669 MobiDBLite consensus disorder prediction 15 62 - -
Bda05g00942 669 PIRSF mRNA_capping_HCE 74 669 IPR017074 GO:0004484|GO:0006370|GO:0140818
Bda05g00942 669 SUPERFAMILY Nucleic acid-binding proteins 543 655 IPR012340 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00942 K13917 - qsu:112006691 1059.67