Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00993 ATGGAGCTGTTGCAGTCGTTGGATGCTGAGATTATTCTGGGTTTTGCTGTAGCTCTTCTTGCCATTGGCGCTGGAGCTCTCTACCTCCTATTTTTCTCCAGGAAATCAACATCCAAAGGCTGTTTGGATCCCGAGAGCTTCAAGGAGTTTAAACTTATCAAGCGAACAAAGCTAAGCCATAATGTGGCAAAATTTACATTTATTCTTCCAAAACCAACTTCAGTTTTGGGTCTTCCCATTGGACAACACTTAAGTTGCAAGGGCAAGGATAGTCAAGGAGAAGAGGTTATAAAACCATATACTCCTACTACGTTGGACTCCGATGTAGGATATTTTGAACTTGTCATAAAGATGTATCCACAAGGAAGAATGTCACACCATTTTAGAGAGATGCGTATTGGGGATCATCTTCCTGTAAAGGGACCAAAGGGACGTTTCAAGTACCAACCTGGTCAAGTTAGAGCATTCGGAATGCTGGCCGGTGGCTCCGGCATTACCCCGATGTACCAGGTCGCTCGGGCAATACTAGAGAACCCTGATGATAAAACAAAGGTACACCTCATATATGCCAATGTTACATATGAGGATATTCTTTTGAAGGAAGAGATTGATTTGCTTGCCTCTAGATATCCGAATCGCTTCAAGATCTACTTCGTCTTGAATCAGCCTCCAGAGAGTTGGAATGGCGGCGTCGGTTTTGTATCGAAGGAAATGATTCAAACCCACTGCCCTGCACCAGCATCTGATATTCAGATTCTAAGGTGCGGCCCCCCGCCAATGAACAAGGCCATGGCAGCTCACCTTGAAGCGCTTGGATATTCGCCGGAGATGCAGTTTCAGTTCTAA 846 44.92 MELLQSLDAEIILGFAVALLAIGAGALYLLFFSRKSTSKGCLDPESFKEFKLIKRTKLSHNVAKFTFILPKPTSVLGLPIGQHLSCKGKDSQGEEVIKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRIGDHLPVKGPKGRFKYQPGQVRAFGMLAGGSGITPMYQVARAILENPDDKTKVHLIYANVTYEDILLKEEIDLLASRYPNRFKIYFVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQILRCGPPPMNKAMAAHLEALGYSPEMQFQF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 58358234 58362768 - Bda022154.1 Bda05g00993 7305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00993 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Bda05g00993 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Bda05g00993 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Bda05g00993 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Bda05g00993 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Bda05g00993 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Bda05g00993 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Bda05g00993 281 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 195 206 IPR001709 GO:0016491
Bda05g00993 281 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 157 176 IPR001709 GO:0016491
Bda05g00993 281 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 251 259 IPR001709 GO:0016491
Bda05g00993 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 IPR001834 GO:0016491
Bda05g00993 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491
Bda05g00993 281 Gene3D - 141 281 IPR039261 -
Bda05g00993 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 138 277 IPR039261 -
Bda05g00993 281 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Bda05g00993 281 CDD cyt_b5_reduct_like 50 281 - -
Bda05g00993 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
Bda05g00993 281 Gene3D Translation factors 40 140 - -
Bda05g00993 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01493 Bda05g00993 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01304 Bda-Chr9:44872317 Bda05g00993 Bda-Chr5:58358234 8.04E-147 transposed
Bda11g00134 Bda-Chr11:1834176 Bda05g00993 Bda-Chr5:58358234 6.25E-57 transposed
Bda13g01500 Bda-Chr13:38038976 Bda05g00993 Bda-Chr5:58358234 3.86E-48 transposed
Bda03g01493 Bda-Chr3:53238692 Bda05g00993 Bda-Chr5:58358234 2.78E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00993 K00326 - csv:101212569 476.478