Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g01018 | ATGGATAGCAGAACAGTGAAGTTTGGTGCAGACGATGTTAGTAAAATCGTTAACGTAATGCCGAGCTTCGTTTCTCAGATCACAACGTCCAATCCAATTGGAACAGAGGGAAACAATATTTCTTCATCTCGAATGACAGACTTCAGAGCGATTGAGCAGTCTCTTGGATTTCGCGTAGAAAACGCTGTTGAACTTTCTAGAAATGCTGCATATAATCAAATGAAGTCAAGTAATCCAATTCTAAGTACAAATATCCAATTTGATGCCTTAAATAAGACATTAGCTCTGCCAAAAGACATGCATCTCAATCCCATTTCAACATCCGTTCCTCAACGAGAAAGCTGGGAGGAGTCTAATACGGTGGATGCCAGCCCCCGGACCGATACTTCAACCGATGACACTGATGAGAAAAATCAGAGGTTTGAAAGGAATCAATTAATTGTCGGTGGAGGCTCCGATTCAAATAACACATCGAGAGAAAAATCTGGGGATCAAAAGACATTGCGCAGACTTGCTCAAAATCGAGAAGCTGCTAGAAAAAGCAGGTTGAGGAAAAAGGCTTACGTACAGCAGCTCGAGAGTAGCCGGTTGAAGCTAACCCAGCTCGAGCAGGAACTCCAGCGAGCACGACAACAGGGGATATTTATTTCAGGTTCTGCAGATCAATCACATTCGATTAGTGGAAATGGTGCGCTAGCCTTCGATGCAGAATATTCGCGTTGGCTAGAAGAGCATAACAGGCTAGTAAACGAGCTGAGAACGGGTGTTAATTCTCACGTGGGCGATGCCGAACTTCGGATTATTGTCGAAGAAGTCACTGCACATTTTGACGACATTTTCAGGCTGAAAGGCATCGCAGCCAAAACTGACGTTTTCCACATTTTGTCCGGAATGTGGAAAACCCCGGCCGAGAGGTGTTTCATGTGGATTGGTGGATTTCGCTCGTCCGAGCTTCTCAAGCTTCTTGTGAGTCAATTGGAACCTCTGACGGAGCAACAGGTGATGGACATCTGCAACCTGCAACAGTCGTCCCAACAGGCCGAAGACGCTCTGTCCCAAGGCATGGAGGCATTGCAGCAATCCTTAGCCGAGACATTGGCCAGCGGCTCCCCTGCATCTTCGGCCTCGTCCGGTAACGTAGCAAACTACATGGGCCAAATGGCCATGGCCATGGGAAAGTTAGGAACTCTCGAAGGCTTCCTTCGCCAGGCTGATAATCTGCGGCAACAAACGCTCCAACAAATGCACCGTATTTTGACAATTCGGCAATCCGCCCGTGCTTTTTTGGCGATAAACGACTACTTTTCCCGACTCCGAGCCCTCAGTTCTCTCTGGCTGGCCAGACCGCGAGAGTGA | 1356 | 47.57 | MDSRTVKFGADDVSKIVNVMPSFVSQITTSNPIGTEGNNISSSRMTDFRAIEQSLGFRVENAVELSRNAAYNQMKSSNPILSTNIQFDALNKTLALPKDMHLNPISTSVPQRESWEESNTVDASPRTDTSTDDTDEKNQRFERNQLIVGGGSDSNNTSREKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISGSADQSHSISGNGALAFDAEYSRWLEEHNRLVNELRTGVNSHVGDAELRIIVEEVTAHFDDIFRLKGIAAKTDVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSQLEPLTEQQVMDICNLQQSSQQAEDALSQGMEALQQSLAETLASGSPASSASSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTIRQSARAFLAINDYFSRLRALSSLWLARPRE | 451 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 58609526 | 58613875 | - | Bda022180.1 | Bda05g01018 | 7330 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g01018 | 451 | Coils | Coil | 185 | 212 | - | - | |
Bda05g01018 | 451 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 56 | 451 | - | - | |
Bda05g01018 | 451 | MobiDBLite | consensus disorder prediction | 128 | 142 | - | - | |
Bda05g01018 | 451 | MobiDBLite | consensus disorder prediction | 102 | 169 | - | - | |
Bda05g01018 | 451 | CDD | bZIP_HBP1b-like | 166 | 218 | - | - | |
Bda05g01018 | 451 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 164 | 208 | IPR004827 | GO:0003700|GO:0006355 | |
Bda05g01018 | 451 | PANTHER | TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 | 56 | 451 | - | - | |
Bda05g01018 | 451 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 169 | 184 | IPR004827 | GO:0003700|GO:0006355 | |
Bda05g01018 | 451 | Pfam | bZIP transcription factor | 166 | 206 | IPR004827 | GO:0003700|GO:0006355 | |
Bda05g01018 | 451 | SMART | brlzneu | 162 | 225 | IPR004827 | GO:0003700|GO:0006355 | |
Bda05g01018 | 451 | Gene3D | - | 165 | 214 | - | - | |
Bda05g01018 | 451 | Pfam | Seed dormancy control | 249 | 324 | IPR025422 | GO:0006351|GO:0043565 | |
Bda05g01018 | 451 | ProSiteProfiles | DOG1 domain profile. | 231 | 448 | IPR025422 | GO:0006351|GO:0043565 | |
Bda05g01018 | 451 | MobiDBLite | consensus disorder prediction | 104 | 127 | - | - | |
Bda05g01018 | 451 | SUPERFAMILY | Leucine zipper domain | 166 | 209 | IPR046347 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g01528 | Bda05g01018 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00706 | Bda-Chr2:47916989 | Bda05g01018 | Bda-Chr5:58609526 | 3.44E-17 | dispersed | |
Bda05g01018 | Bda-Chr5:58609526 | Bda07g00678 | Bda-Chr7:8066215 | 6.06E-109 | dispersed | |
Bda07g00974 | Bda-Chr7:11611830 | Bda05g01018 | Bda-Chr5:58609526 | 1.21E-08 | dispersed | |
Bda09g00251 | Bda-Chr9:3250373 | Bda05g01018 | Bda-Chr5:58609526 | 1.76E-39 | dispersed | |
Bda10g00415 | Bda-Chr10:36403918 | Bda05g01018 | Bda-Chr5:58609526 | 4.01E-14 | dispersed | |
Bda01g02086 | Bda-Chr1:57033172 | Bda05g01018 | Bda-Chr5:58609526 | 8.11E-69 | transposed | |
Bda03g00605 | Bda-Chr3:5023199 | Bda05g01018 | Bda-Chr5:58609526 | 9.58E-104 | transposed | |
Bda03g01602 | Bda-Chr3:55324750 | Bda05g01018 | Bda-Chr5:58609526 | 3.22E-108 | transposed | |
Bda14g00422 | Bda-Chr14:3063390 | Bda05g01018 | Bda-Chr5:58609526 | 2.72E-129 | transposed | |
Bda03g01528 | Bda-Chr3:54183585 | Bda05g01018 | Bda-Chr5:58609526 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15936 | PF14144 | DOG1 | 2.20E-29 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g01018 | K14431 | - | qsu:112036206 | 651.358 |