Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01038 ATGTCAGGATACGCTTTGCTTATTGATGAATCAAGCTTATCTGGAGAGACTGAACCAGTGAACATATATGAAGAGAAACCATTTCTTCTTTCGGGCACTAAAGTACAAGATGGTTCTGCGAAGATGCTGGTGACAGCTGTCGGGATGAGAACTGAATGGGGAAAGTTGATGGAAACTCTAAATGAGGTGGGAGAAGATGAAACTCCATTGCAGGTGAAGTTAAATGGTGTTGCTACGCTTATTGGAAAAATTGGTTTAGTCTTTGCTGTGGTAACATTTTTGGCGTTGATAGGGAGGTTTCTGGTGAAAAAATACCTTCAACACACGTTGGCAGTTTGGTCTTCTAGTGATGCACTTCAGCTTCTTGATTTCTTTGCTATAGCTGTGACCATAGTTGTTGTCGCAGTTCCGGAAGGATTACCGCTGGCAGTGACACTTAGTCTTGCGTTTGCGATGAAGAAATTAATGGACGAAAGAGCACTTGTGAGGCATCTCTCTGCATGTGAAACAATGGGTTCTGCTAGTAGCATTTGCACTGACAAGACTGGGACGTTGACAACTAATCATATGGTAGTAGATAAAATATGGATTTCTGGAAAATCTATTAGCATAAGACACCACGAGAGTAATGATGATCTGGGATCAGAAATATCTGACGGTGCTATGAACATCCTTTTACAGTCTATCTTTCAAAATACAAGTTGTGAAGTGTCAAAAAATAAGGATGGGAAGATCTCCATCATGGGAGGAACGCCAACAGAATCAGCCTTGTTAGAATTTGGCTTGTTTCTTGGCGGAGTTTATGATGCCCAGCGGAGAGCATTTAAAATACTTAAGATTGAGCCATTCAATTCTGTTAGGAAGAAGATGTCAGTGCTTGTGGCCCTTCCTGATGGCGGAAGACGAGCTTTTTGCAAAGGGGCATCAGAAATAATACTAAGAATGTGTGACAAGATTGTTGATGGCAATGGACATACTGTTCCCTTACCGAAAGAACAGGTAAGAACTGTGGCAGATGCAATCAATGGTTTTGCTTCTGAAGCATTAAGAACCCTTTGTTTGGCTTTCCAAGATATAGATGGAAACTCATTTCCAGAGGGTGGCTTCACATTGGTGGCTGTTGTTGGAATCAAGGACCCTGTACGACATGGAGTCAAGGATGCTGTCAAAACTTGTTTGGATGCTGGAATAACTGTTCGAATGGTCACGGGTGACAATATACATACAGCTAAAGCCATAGCTAAAGAATGTGGTATCCTTACACCTAATGGTTTGGCCATAGAAGGATCAGATTTTCGTAGCTTGTCTCCTGACCAGATGAAGGAAATTATCCCAAGACTCCAGGTCATGGCTCGATCATTGCCGATGGACAAGTATACCTTGGTCACCAATCTGAGAAAAACATTTGGTGAGGTTGTTGCAGTGACAGGCGATGGGACAAATGATGCTCCAGCCTTGCATGAGTCAGATATTGGATTGGCTATGGGCATTGCTGGAACAGAGGTTGCCAAAGAAAATGCTGACGTCATCATAATGGATGATAATTTTTCAACTATAGTGAATGTAGCCAAATGGGGACGCTCAGTGTATATAAACATACAAAAATTTGTACAGTTTCAGCTAACAGTCAACATTGTTGCCCTGGTGACCAATTTTGTTTCCGCATGCCTTTCTGGATCTGCTCCTCTTACTGCTGTGCAGTTGCTGTGGGTCAACTTAATTATGGACACTCTTGGTGCATTGGCACTTGCTACAGAGCCTCCTGATGATACATTAATGAAAAGACGCCCTGTAACGAAGGGTATGAGTTTCATTACCAAAGCCATGTGGAGGAACATTATTGGCCAAAGCATTTATCAACTAGCTGTTCTTGGTGTTCTTAATTTTGCTGGGAAGCGGATTCTACGACTAGATGGCTCTGGCGCCACTGATGTTCTGAATACTTTGATTTTCAACGCATTCGTCTTTTGTCAGGTGTTTAATGAAATAAACAGCCGTGAAATAGAGAAGATCAACATCTTCCATGGCTTGTTTAACAGCTGGATATTTATTACTATCGTCGTTTCAACAGCTGTTTTTCAAGTGATAATTGTTGAATTTTTGGGTGATTTTGCCAGCACTGTACCACTCAGCTGGAAATTTTGGGTACTAAGTATTGTGATTGGATTTGTTAGCATGCCGATTGCAGTAGTTTTGAAGTGCATTCCTGTTGAAAGAAATTCAACCAAGCATCATGATGGCTATGAAGCACTGCCTTCCGGTCCTGAACTGGCATGA 2277 41.85 MSGYALLIDESSLSGETEPVNIYEEKPFLLSGTKVQDGSAKMLVTAVGMRTEWGKLMETLNEVGEDETPLQVKLNGVATLIGKIGLVFAVVTFLALIGRFLVKKYLQHTLAVWSSSDALQLLDFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMDERALVRHLSACETMGSASSICTDKTGTLTTNHMVVDKIWISGKSISIRHHESNDDLGSEISDGAMNILLQSIFQNTSCEVSKNKDGKISIMGGTPTESALLEFGLFLGGVYDAQRRAFKILKIEPFNSVRKKMSVLVALPDGGRRAFCKGASEIILRMCDKIVDGNGHTVPLPKEQVRTVADAINGFASEALRTLCLAFQDIDGNSFPEGGFTLVAVVGIKDPVRHGVKDAVKTCLDAGITVRMVTGDNIHTAKAIAKECGILTPNGLAIEGSDFRSLSPDQMKEIIPRLQVMARSLPMDKYTLVTNLRKTFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVAKWGRSVYINIQKFVQFQLTVNIVALVTNFVSACLSGSAPLTAVQLLWVNLIMDTLGALALATEPPDDTLMKRRPVTKGMSFITKAMWRNIIGQSIYQLAVLGVLNFAGKRILRLDGSGATDVLNTLIFNAFVFCQVFNEINSREIEKINIFHGLFNSWIFITIVVSTAVFQVIIVEFLGDFASTVPLSWKFWVLSIVIGFVSMPIAVVLKCIPVERNSTKHHDGYEALPSGPELA 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 58817771 58820530 - Bda022204.1 Bda05g01038 7350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01038 758 PANTHER CALCIUM-TRANSPORTING ATPASE 1 744 - -
Bda05g01038 758 PRINTS H+-transporting ATPase (proton pump) signature 337 355 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g01038 758 PRINTS H+-transporting ATPase (proton pump) signature 476 492 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g01038 758 PRINTS H+-transporting ATPase (proton pump) signature 508 533 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g01038 758 PANTHER CATION TRANSPORTING ATPASE 1 744 - -
Bda05g01038 758 ProSitePatterns E1-E2 ATPases phosphorylation site. 180 186 IPR018303 -
Bda05g01038 758 SUPERFAMILY HAD-like 177 581 IPR036412 -
Bda05g01038 758 Pfam E1-E2 ATPase 2 156 - -
Bda05g01038 758 Pfam haloacid dehalogenase-like hydrolase 177 489 - -
Bda05g01038 758 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 6 202 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g01038 758 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 441 564 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g01038 758 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 273 420 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g01038 758 SFLD p-type atpase 160 528 IPR044492 -
Bda05g01038 758 Gene3D - 191 380 IPR023299 GO:0000166
Bda05g01038 758 Pfam Cation transporting ATPase, C-terminus 561 734 IPR006068 -
Bda05g01038 758 Gene3D - 4 190 - -
Bda05g01038 758 Gene3D - 490 743 - -
Bda05g01038 758 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 184 385 IPR023299 GO:0000166
Bda05g01038 758 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 2 738 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bda05g01038 758 SUPERFAMILY Calcium ATPase, transmembrane domain M 61 738 IPR023298 -
Bda05g01038 758 SUPERFAMILY Calcium ATPase, transduction domain A 5 59 IPR008250 -
Bda05g01038 758 SFLD C1.7: P-type atpase like 160 528 - -
Bda05g01038 758 PRINTS P-type cation-transporting ATPase superfamily signature 373 384 - -
Bda05g01038 758 PRINTS P-type cation-transporting ATPase superfamily signature 395 405 - -
Bda05g01038 758 PRINTS P-type cation-transporting ATPase superfamily signature 9 23 - -
Bda05g01038 758 PRINTS P-type cation-transporting ATPase superfamily signature 178 192 - -
Bda05g01038 758 PRINTS P-type cation-transporting ATPase superfamily signature 476 495 - -
Bda05g01038 758 PRINTS P-type cation-transporting ATPase superfamily signature 500 512 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01038 Bda-Chr5:58817771 Bda11g01478 Bda-Chr11:21500638 0 dispersed
Bda03g01554 Bda-Chr3:54677413 Bda05g01038 Bda-Chr5:58817771 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01038 K01537 - jre:109010491 1179.08