Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01069 ATGGGGAGCTATGGCTGTAGCAATGGGAGTGAAGGAGACGGTAGTCCATCTCCAAACAGACTAAAAAGCCAACTTAGCTTCTCCTCGAGACTACCTTCCCGTCTCGGAATTTTACCAGATATCTCCGAAATCAGAGACGAATCTATTGCTGGGGCCGACAAAAAGCTTGGAAACAACAACGGGGATGCTCCTCTTCACAGTCCTGGATCCGCATACGGGTCTTGGATTGGGTCGTCGCCTTTTGGAGAAAACTTCGGCGGAATCAAACGAGATTATCATAACGATGGGAAGTTATTTCCCAATTCTCAGAACGAAAAGCTTAGAAATGCAGTTCATTTGTTATCGCATCAATTGAGCATGCCTCAGACTTCGTCCGAAGTGCTTGCAATCGAGAAATTCTTGCAATTCCAAGACTCAGTTCCTTGTAGAATACGAGCCAAACGAGGCTGCGCAACACATCCTCGGAGCATTGCAGAAAGGGTGAGACGAACTCGGATAAGTGAGCGAATGAGGAAACTACAAGAACTTGTACCAAACATGGACAAGCAAACAAACACTGCAGATATGCTAGACTTGGCTGTGGACTACATCAAAGACCTGCAGAAACAGTTCAAGGCCCTCAGCACAAACCGGGCAAACTGCAAGTGTGTGACAACGAAGAAGTGTGTGACGGACCAGATAATTTGA 687 46.58 MGSYGCSNGSEGDGSPSPNRLKSQLSFSSRLPSRLGILPDISEIRDESIAGADKKLGNNNGDAPLHSPGSAYGSWIGSSPFGENFGGIKRDYHNDGKLFPNSQNEKLRNAVHLLSHQLSMPQTSSEVLAIEKFLQFQDSVPCRIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQFKALSTNRANCKCVTTKKCVTDQII 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 59128726 59129801 + Bda022235.1 Bda05g01069 7381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01069 228 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 150 200 IPR011598 GO:0046983
Bda05g01069 228 PANTHER TRANSCRIPTION FACTOR BHLH130 1 220 - -
Bda05g01069 228 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 212 IPR036638 GO:0046983
Bda05g01069 228 Pfam Helix-loop-helix DNA-binding domain 155 201 IPR011598 GO:0046983
Bda05g01069 228 SMART finulus 156 206 IPR011598 GO:0046983
Bda05g01069 228 MobiDBLite consensus disorder prediction 1 23 - -
Bda05g01069 228 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 220 - -
Bda05g01069 228 Gene3D - 151 223 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01069 Bda-Chr5:59128726 Bda09g01364 Bda-Chr9:45464584 1.10E-53 dispersed
Bda03g01606 Bda-Chr3:55356807 Bda05g01069 Bda-Chr5:59128726 3.37E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15943 PF00010 HLH 1.80E-10 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01069 - - minc:123225002 320.087