Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01086 ATGGAAGCGATGCAAATAGATTCGGAGCAAAATCTTCAGCGACTGCAATCGTCCTACAGATCCTTTGACGAGAACTATGATATTCAGAATGAGGAGTACAGGGGTCAGCAGTACAGTCAGATTTACTTTGCGCGTCTCCAGCTTATGAGAGCGGTCCTTTCTTCCCTTGTTCCTAACTGGAAACCCCATCTGCCTGTCTGCACTGTGCTGGAGTTGGAAGATGGCAAGGAATGCATCATAGTTGGAACCATTTACAAGCACATGAAACTCAAGCCCACAATTCTGCACGAGTATTCAAAAGAGAGATCAGTCACTCCATTAGTTAAGCCACATAACTTTATGCACCCTGATGATCAACTAGTTTTGGAAGATGAAAGTGGAAGAGTGAAGCTTTCTGGAACTACTGATTTCACCATCGACATTTCAGGGATTGTTGTTGCTTTGCATGGAAAGGAAACTTCTGCTGGTGACTTTTTCGTATTAGATGTCTTAGAAGCCGGACTACCATCTCAGAGAGAGATGCCTCATATGATAAGGGAAGACAAGTATGTTGTCATTGTGTCAGGGCTAAGCATTGGTAGTAGCACTTCTAACCCCTTGCAGTTTCAGCTTCTTGTTGATCATTTAACTGGGCATTTAGGAGATGAGAAGGAACAAGGTATTGCAGCAAAAATAGTTCGGCTTGTAATTGCTGGAAATTCTGTTGAAATATCTCGTGGGCTTCTTAATGGACAGAATTTGGCTAGTAAAGATCAGTCAAGGCTGTCTGAGCCTATCACCGAACTGGATATCTTGTTAACTCAGCTTGTTGCTGGTTTACCTGTGGACATCATGCCTGGTGCAAGTGATCCGGCCAACTTTTCTTTACCTCAACAGCCGCTGCATAAATGCCTTTTCCCTGGATCGTCAGCTTATAACACTTTTAGATCCTGTACAAATCCTCATTCCTTCGAGATTGATAATATCAGTTTTCTTGGAACATCAGGTCAGAACATAGACGATCTTGCAAAATACTCAGAGGCAAAGGATAAAGTTGAATTTGTGGAGAGGACATTGAAATGGAGGCATCTGGCTCCCACTGCTCCAAATACTCTTGGCTGTTATCCTTTCACGGATAAGGATCCTTTCCTGATTGAGGATTGTCCTCATGTTTATTTCGTAGGTAATCAAGATACCTATGATACTCGCCTAATTGAAGGGCATGAGGGTCAGATGGTCAGACTCATTTGTGTTCCAAAATTCTGCGATACAGGCGTTGCTGTTATGGTAAACTTACGAAATCTCGAATGCCATACTCTCAGTTTTCGGACCGATTTCAGCTAG 1323 42.86 MEAMQIDSEQNLQRLQSSYRSFDENYDIQNEEYRGQQYSQIYFARLQLMRAVLSSLVPNWKPHLPVCTVLELEDGKECIIVGTIYKHMKLKPTILHEYSKERSVTPLVKPHNFMHPDDQLVLEDESGRVKLSGTTDFTIDISGIVVALHGKETSAGDFFVLDVLEAGLPSQREMPHMIREDKYVVIVSGLSIGSSTSNPLQFQLLVDHLTGHLGDEKEQGIAAKIVRLVIAGNSVEISRGLLNGQNLASKDQSRLSEPITELDILLTQLVAGLPVDIMPGASDPANFSLPQQPLHKCLFPGSSAYNTFRSCTNPHSFEIDNISFLGTSGQNIDDLAKYSEAKDKVEFVERTLKWRHLAPTAPNTLGCYPFTDKDPFLIEDCPHVYFVGNQDTYDTRLIEGHEGQMVRLICVPKFCDTGVAVMVNLRNLECHTLSFRTDFS 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 59225326 59229397 + Bda022251.1 Bda05g01086 7398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01086 440 Gene3D - 44 166 - -
Bda05g01086 440 CDD MPP_PolD2_C 183 435 IPR041863 -
Bda05g01086 440 Pfam DNA polymerase delta subunit OB-fold domain 37 163 IPR040663 -
Bda05g01086 440 Pfam DNA polymerase alpha/epsilon subunit B 184 393 IPR007185 GO:0003677|GO:0006260
Bda05g01086 440 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 8 436 IPR024826 -
Bda05g01086 440 Gene3D - 170 439 - -
Bda05g01086 440 Coils Coil 12 32 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01086 K02328 - vvi:100241865 720.694