Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01130 ATGGCGAAGTACTTTCAGGGTAATCCAGAAATCCAAGCTCCAGATGGATTACAGACGCTAGTACTAATGAATCCTGGCTACGTACAGTTCTCCGATTCCCTTCCGCCGCCTCCGACCAACATTGTATTCTTCAATTCTGGAGCCAGAAATTATTTAACTTCTCAGAATCTTCACCACGCGCCCCCATCCCAATCCCCGCAATTCGCCGGGATTCCTTTGCCGGTTTCTCTTTCCCCTACTTCTAAAGAAGCTAATTCTCATCCCACACATCCCCACCATTTGTCCGCCTCGCATGGACTCATCCCCCAAGCCAAATTCAATCACTGGAATCCGATCAACTCTCCAGGCGCGCGTGAATCTCAACGCACCACACAAGGACTTTCCCTCAGCCTCTCCTCTCAGCAGCCCGGTTATGGGTCTCAACGAACCGGACGACAAACCTCATCCCCAGCTCAACACGCAGTTTCCGGCGAGGGAATTCGGATTTCCGGTGCGTCATCATCGGTTTCCGGTAATACCAACGACGTTTCAGGTGTACATGGTGTGTTGCTGTGCTCAAAGTACTTGAAAGCGGCCCAAGATCTCCTCGAAGAAGTCGTAAATCTAGGCACCGATGAATCTAAGAATGAATCACCGAGAAAACCTAACGGCAGTAAGATCACCGAAAAGCCATCTATGACGGCAACTGAAAATGGCTCAGACGGAGCTGAAGAAGCTCGGAAAGACAGTCCAGAGCTTTCAACAGCCGAGAGACTGGACATTCAGATAAAGAAGGCAAAGCTTATCAGTATGCTTGACGAGGTGGAGCAAAGGTACAGACAATACCATCATCAGATGCAGATCGTCATATCGTCGTTCGAACAAGCGACTGGAATGGGATCGGCAAGATCGTACACATCACTTGCTCTCAAAACAATTTCGAAGCAATTCCGGTGCTTGAAAGACACAATTACAGGCCAAATTAGGGCAGCAAAGAAGAGTTTAGGGGAAGAAGATAATGCAGGGGGTAAAATAGGTAGTTCGAGGCTGAAATTTGTGGATCATCAGCTTGGACAGCAAAGAGCTCTTCAGCAACTGGGAATGATCCAGCAGAATGCTTGGAGACCCCAAAGAGGCCTACCTGAACGCTCTGTCTCTGTCCTTCGCGCTTGGCTTTTCGAACACTTTCTCCACCCTTATCCAAAGGATTCGGATAAGCAAATGCTGGCCAAGCAAACAGGGCTTACGAGGAGCCAGGTTTCTAATTGGTTTATAAACGCACGAGTTCGTCTATGGAAGCCAATGGTAGAAGAAATGTATACGGAGGAAACCCAGGAGCAAGAACAGATTGGTTGTGCAGAAACCATCAACAAAATCAAAGAAAACTCACCTTCCAACTCCATTTCTCCGACAGGAAAAGCTCCTCCAATTCAAAATTTTTCTCCAAGCTCCCATTCTACAGACGAACTTTCTACACTCACAGCCTCTAAATCCTCCATGGGACGAAACGTTCGAAACTCATCCGCATTGAGGCTCCCCAGGCCGTCGGAGCTTGGGCCAAGTCCTAAAAAACTGAAGAACTCCGAAATGATAATGAATTCTTCATCCAACTTCATCAACGGAAAGCAAGCTCAATCGAACCCCAAGAACAGTGCGGTGAAAGTAGCCGACGGGAAGCCAAGCCGAGATGAATACTCATTTCCGACGAATCAAACTGATTTTGCAGGCGGATTCGTAGAGTATCCAATCGGTCAAATAGGCCGATACAATAACGAGCAATACACGACTCGTTTTTCCGGCAATGGCGTCTCTCTCACTCTCGGGCTCCCCCACCATAATTTTCTTCCAAACCACCAACCAATCCATTTGGGAGGACGAATCGACATCAGCCAACCAAACGAGTTTGCCGGAATAAACTCCCCAACTCCTCATCCCACCACTGCTTTCGACAACATCGATATTCAGAACAGAAAACGATTTGTCGCACAATTGTTGCCGGATTTCGTGGCCTAA 1992 47.89 MAKYFQGNPEIQAPDGLQTLVLMNPGYVQFSDSLPPPPTNIVFFNSGARNYLTSQNLHHAPPSQSPQFAGIPLPVSLSPTSKEANSHPTHPHHLSASHGLIPQAKFNHWNPINSPGARESQRTTQGLSLSLSSQQPGYGSQRTGRQTSSPAQHAVSGEGIRISGASSSVSGNTNDVSGVHGVLLCSKYLKAAQDLLEEVVNLGTDESKNESPRKPNGSKITEKPSMTATENGSDGAEEARKDSPELSTAERLDIQIKKAKLISMLDEVEQRYRQYHHQMQIVISSFEQATGMGSARSYTSLALKTISKQFRCLKDTITGQIRAAKKSLGEEDNAGGKIGSSRLKFVDHQLGQQRALQQLGMIQQNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYTEETQEQEQIGCAETINKIKENSPSNSISPTGKAPPIQNFSPSSHSTDELSTLTASKSSMGRNVRNSSALRLPRPSELGPSPKKLKNSEMIMNSSSNFINGKQAQSNPKNSAVKVADGKPSRDEYSFPTNQTDFAGGFVEYPIGQIGRYNNEQYTTRFSGNGVSLTLGLPHHNFLPNHQPIHLGGRIDISQPNEFAGINSPTPHPTTAFDNIDIQNRKRFVAQLLPDFVA 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 59513484 59515853 - Bda022296.1 Bda05g01130 7442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01130 663 MobiDBLite consensus disorder prediction 58 159 - -
Bda05g01130 663 MobiDBLite consensus disorder prediction 453 503 - -
Bda05g01130 663 MobiDBLite consensus disorder prediction 218 232 - -
Bda05g01130 663 ProSiteProfiles 'Homeobox' domain profile. 364 427 IPR001356 GO:0003677
Bda05g01130 663 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 615 - -
Bda05g01130 663 SMART HOX_1 367 431 IPR001356 GO:0003677
Bda05g01130 663 MobiDBLite consensus disorder prediction 453 520 - -
Bda05g01130 663 MobiDBLite consensus disorder prediction 234 248 - -
Bda05g01130 663 Pfam Homeobox KN domain 384 423 IPR008422 GO:0003677|GO:0006355
Bda05g01130 663 MobiDBLite consensus disorder prediction 532 562 - -
Bda05g01130 663 Pfam Associated with HOX 182 318 IPR006563 -
Bda05g01130 663 MobiDBLite consensus disorder prediction 203 217 - -
Bda05g01130 663 SMART prehox3 177 319 IPR006563 -
Bda05g01130 663 CDD homeodomain 367 428 IPR001356 GO:0003677
Bda05g01130 663 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 615 - -
Bda05g01130 663 MobiDBLite consensus disorder prediction 203 248 - -
Bda05g01130 663 MobiDBLite consensus disorder prediction 107 154 - -
Bda05g01130 663 SUPERFAMILY Homeodomain-like 368 434 IPR009057 -
Bda05g01130 663 Gene3D - 370 447 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00660 Bda05g01130 CCT
Bda01g00423 Bda05g01130 CCT
Bda03g01628 Bda05g01130 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01326 Bda-Chr1:48863701 Bda05g01130 Bda-Chr5:59513484 3.93E-49 dispersed
Bda02g00751 Bda-Chr2:48265321 Bda05g01130 Bda-Chr5:59513484 7.24E-73 dispersed
Bda03g00272 Bda-Chr3:2397758 Bda05g01130 Bda-Chr5:59513484 3.12E-88 dispersed
Bda05g01130 Bda-Chr5:59513484 Bda14g01214 Bda-Chr14:12216414 5.99E-85 dispersed
Bda04g00315 Bda-Chr4:46953423 Bda05g01130 Bda-Chr5:59513484 3.71E-90 transposed
Bda01g00423 Bda-Chr1:30787966 Bda05g01130 Bda-Chr5:59513484 0 wgd
Bda03g01628 Bda-Chr3:55639780 Bda05g01130 Bda-Chr5:59513484 0 wgd
Bda03g00660 Bda-Chr3:5622800 Bda05g01130 Bda-Chr5:59513484 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15949 PF07526 POX 2.90E-48 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01130 - - zju:107433631 710.679