Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01144 ATGGAAAACCAACCTTATTCTCAACAATTCAACCCTCAGATCTATACCCACCAGAACCAGCCTTGGCTGCTTAGTAATTTCAACCTCAACAGAGAAAACAACGTCGAAGATGACGAAATCGACGACCTAACCAGAACAGAAGATGGAGAAGAAGGCGGCGCCGCCGCTAGTCGAGATGAGTGGGAGGAAACAGCGGATAAACAATCCATGTTTGAAAAGGCATTAACGCCCAGTGATGTCGGAAAACTGAACCGGCTCGTCATTCCGAAACAACACGCCGAGAAATACTTCCCGCTCGGAGATGGCGGAGACTCCGCCGACAAGGGTTTGCTTCTGAGCTTCGAGGATGAGGCCGGAAAATCGTGGAGGTTCCGTTACTCTTACTGGAATAGTAGCCAAAGCTACGTTCTTACCAAGGGGTGGAGCCGGTATGTTAAAGAGAAGAGGCTAGCATCTGGTGACGTCGTTTTCTTTCAGCGACATCGGACGAACGGCGAGCGGTTGTTCATAGGGTGGAGGCGGCGGCCGGCGCAGCGTAGCAGCAGTGCAGTGATGGCGCAGGAAGGTAATGGTAATAGTAATCAAGGGAGTGGGGGGTGGACCAGATTCTTCTATTCTGCGCATCCTTATCCCGAACACAGCCATCATCCTGATCATCAGCTTCGTCTCCATCATTATCATCCAGCGCCATACCAACCTGATTGTCTTCATGCTGGGTCAGTCTCCGGCCACACCCCAACGGCTTCAGTCGGAAACTCGAAGATACTGAGACTTTTTGGTGTAAACATGGAGTGCCAAACCGACGTCTCCGACGACCCATCTACGCCTTCTCCTTCTCTTCTAACCAAATCGGCGACACCCAATCACCAGTTCTTCCCGCAGTATATTTCTTCAAATCCTGCTAATCATACGGTATGA 918 50.76 MENQPYSQQFNPQIYTHQNQPWLLSNFNLNRENNVEDDEIDDLTRTEDGEEGGAAASRDEWEETADKQSMFEKALTPSDVGKLNRLVIPKQHAEKYFPLGDGGDSADKGLLLSFEDEAGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLASGDVVFFQRHRTNGERLFIGWRRRPAQRSSSAVMAQEGNGNSNQGSGGWTRFFYSAHPYPEHSHHPDHQLRLHHYHPAPYQPDCLHAGSVSGHTPTASVGNSKILRLFGVNMECQTDVSDDPSTPSPSLLTKSATPNHQFFPQYISSNPANHTV 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 59629321 59630543 + Bda022311.1 Bda05g01144 7456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01144 305 ProSiteProfiles B3 DNA-binding domain profile. 71 175 IPR003340 GO:0003677
Bda05g01144 305 CDD B3_DNA 70 166 IPR003340 GO:0003677
Bda05g01144 305 Pfam B3 DNA binding domain 71 175 IPR003340 GO:0003677
Bda05g01144 305 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 21 279 IPR044800 GO:0003700
Bda05g01144 305 MobiDBLite consensus disorder prediction 47 63 - -
Bda05g01144 305 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 21 279 - -
Bda05g01144 305 Gene3D - 64 185 IPR015300 -
Bda05g01144 305 SUPERFAMILY DNA-binding pseudobarrel domain 67 175 IPR015300 -
Bda05g01144 305 SMART B3_2 71 176 IPR003340 GO:0003677
Bda05g01144 305 MobiDBLite consensus disorder prediction 267 286 - -
Bda05g01144 305 MobiDBLite consensus disorder prediction 38 63 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01650 Bda05g01144 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01144 Bda-Chr5:59629321 Bda07g00161 Bda-Chr7:1999022 2.74E-47 dispersed
Bda12g00689 Bda-Chr12:33397373 Bda05g01144 Bda-Chr5:59629321 5.86E-11 dispersed
Bda09g00108 Bda-Chr9:1959470 Bda05g01144 Bda-Chr5:59629321 8.79E-16 transposed
Bda03g01650 Bda-Chr3:55852070 Bda05g01144 Bda-Chr5:59629321 2.83E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15951 PF02362 B3 4.80E-30 CL0405 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01144 - - zju:107415017 313.538