Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01192 ATGAAGGTGAAGGACAAGAAAATTTTTTCTCTTTCTCTCTCCTCCATACCAACTGTAGTCTTCTTCTTCTTCTTCCTCCTCCTCTGTTACACGGCTTCTTCTACCTTGTCGCCTCCCAATGACACCTCTGTACTCACCTATTTCCGTGTCGGCGCTGATTCCCACGGAAATCTTCTCCCCAACTGGACCGGCTCCGATGCATGCGCCGCTGCATGGCTGGGAGTTCAATGCTCGTCTGCCGGACGAGTTATCGCTCTCTCACTACCGTCGATCAACCTCCGGGGCCCAGTTCTGAATCTGGCTAAGCTTGACCAGCTTCGCCTTCTCGACCTCCATGATAACCGCCTGAACGGAACCGTTTTGCCCCTCATGAACTGCACCCAACTCAAGCTTCTGTATCTTGCTGGCAATGACTTCTCCGGCGAGATTCCACCGGAGATTTCCTCACTCAGGCACATCGTCCGACTTGATCTCTCCGATAACAACATACGAGGCGCGATTCCCAACGAGCTCTCGCGATTGACTCGACTCCTCACGCTTCGGCTTGAAAATAACATGATTTCTGGTACAGTTCCAGATCTTTCCTCTTCACTCGTCAATCTAACAGAATTGAATTTGACGAACAATGATCTGTCCGGAAGATTGCCCGATAATTTGCTCAGAAAATTCGGCCCAAAAAGCTTTTCAGGAAACGAAGGTCTATGCGGATCAACACCGTTGGGTGCTTGTTCCTTCGCCGGAACTTCACCGGAGATAGCTTCTTCGCAAACGGTACCGTCAAATCCTAGCTCAATCCCTCAAACTCCAATTCTAACCGAAGATGATAAAAAATCGCACAAATCCCTTAGCACCGGCGCTATAGTCGCAATCGCAATCGCCAATTCCGTTGCATTGCTGGTAATCATCTCCTTCGTCGTCGCCCACTACTGCGCCAGATATCAAAGCTCGCCTTCAATGGCGGGAAGCGAAATCAGAAAGGGAAGAAGGAGCGGAAGCAGCTACGGAAGCGAGAAGAAAGTATACGCAAATGGAGGAGACAGCGACGCGACGAACGCCACAGATCGAAGCAAGCTCGTGTTCTTCGACAGGAAGAAGCAGTTCGAGCTGGAGGATTTGCTGCGGGCGTCTGCGGAGATGCTGGGGAAAGGCAGTCTAGGGACGGTATACAGAGCGGTGTTGGATGACGGCTGTACGGTGGCGGTGAAGAGGCTGAAGGACGCGAATCCATGTGCGAGGAAGGAGTTCGAACAGTACATGGATGTAATAGGGAGGCTGAAACACCCAAATGTAGTAAAGCTCAGAGCTTACTATTACGCGAGGGAGGAGAAGCTTCTGGTTTATGATTATCTTCCTAATGGAAGCTTGCATTATCTTCTTCACGGGAACAGGGGTCCAGGAAGAATCCCACTGGATTGGACCACAAGAATCAGCTTGGTGTTGGGAGCAGCTCGAGGGCTTGCCAGGATTCACGCAGAGTACAGCGAAACAAGCATCCCCCATGGCAACGTCAAGTCTTCCAATGTTCTTCTCGACAAAAACGGGCTCGCATGCATTTCGGATTTCGGGTTGTCTCTCCTTCTAAACCCGGTTCACGCCATTGCAAGATTGGGAGGATACAAAGCTCCAGAACAAGCAGAGACGAAGAAGTTGTCTCAGCAGGCAGACGTATACAGCTTTGGAGTCTTGTTACTCGAAACACTTACCGGTCGAGCTCCATTACAGTATCCTTCACATACCAGGGCTAGAATGGAGGAGGAAGAAGACGGAGGAGAAGAAGATCTTCCAAAATGGGTGCGATCTGTGGTGAAAGAAGAGTGGACCGCCGAAGTGTTTGATCCTGAGCTTTTGAGGTACAAAAACATTGAAGAGGAGCTTGTCTCCATGCTTCACGTTGGGCTAGCCTGTGTTGTATGGCCACCGGAAAAGAGGCCATCAATGGCTGAAGTTGCAAAGATGATCGAGGATATCAGAGTTGAACAGTCTCCACTCGGAGAAGACTACGACGAGTCCAGAAATTCACTTTCGCCCTCTTTGGCTACCACTGAAGATTGA 2052 50.19 MKVKDKKIFSLSLSSIPTVVFFFFFLLLCYTASSTLSPPNDTSVLTYFRVGADSHGNLLPNWTGSDACAAAWLGVQCSSAGRVIALSLPSINLRGPVLNLAKLDQLRLLDLHDNRLNGTVLPLMNCTQLKLLYLAGNDFSGEIPPEISSLRHIVRLDLSDNNIRGAIPNELSRLTRLLTLRLENNMISGTVPDLSSSLVNLTELNLTNNDLSGRLPDNLLRKFGPKSFSGNEGLCGSTPLGACSFAGTSPEIASSQTVPSNPSSIPQTPILTEDDKKSHKSLSTGAIVAIAIANSVALLVIISFVVAHYCARYQSSPSMAGSEIRKGRRSGSSYGSEKKVYANGGDSDATNATDRSKLVFFDRKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCARKEFEQYMDVIGRLKHPNVVKLRAYYYAREEKLLVYDYLPNGSLHYLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSETSIPHGNVKSSNVLLDKNGLACISDFGLSLLLNPVHAIARLGGYKAPEQAETKKLSQQADVYSFGVLLLETLTGRAPLQYPSHTRARMEEEEDGGEEDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVVWPPEKRPSMAEVAKMIEDIRVEQSPLGEDYDESRNSLSPSLATTED 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 59960829 59962962 + Bda033677 Bda05g01192 7504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01192 683 MobiDBLite consensus disorder prediction 667 683 - -
Bda05g01192 683 MobiDBLite consensus disorder prediction 321 348 - -
Bda05g01192 683 SUPERFAMILY L domain-like 39 228 - -
Bda05g01192 683 MobiDBLite consensus disorder prediction 660 683 - -
Bda05g01192 683 Gene3D Transferase(Phosphotransferase) domain 1 450 674 - -
Bda05g01192 683 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 675 - -
Bda05g01192 683 Gene3D Ribonuclease Inhibitor 122 245 IPR032675 -
Bda05g01192 683 Gene3D Phosphorylase Kinase; domain 1 343 449 - -
Bda05g01192 683 Pfam Protein kinase domain 378 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g01192 683 Gene3D Ribonuclease Inhibitor 38 117 IPR032675 -
Bda05g01192 683 PANTHER LRR RECEPTOR-LIKE KINASE 26 675 - -
Bda05g01192 683 CDD STKc_IRAK 380 656 - -
Bda05g01192 683 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515
Bda05g01192 683 ProSiteProfiles Protein kinase domain profile. 374 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g01192 683 SUPERFAMILY Protein kinase-like (PK-like) 378 653 IPR011009 -
Bda05g01192 683 MobiDBLite consensus disorder prediction 251 271 - -
Bda05g01192 683 MobiDBLite consensus disorder prediction 251 276 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01192 Bda-Chr5:59960829 Bda11g00126 Bda-Chr11:1705789 1.53E-155 dispersed
Bda07g01723 Bda-Chr7:32268414 Bda05g01192 Bda-Chr5:59960829 4.12E-100 dispersed
Bda05g01192 Bda-Chr5:59960829 Bda14g01104 Bda-Chr14:9917092 1.42E-147 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69648 PF00069 Pkinase 2.10E-32 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01192 - - bhj:120091526 999.193