Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01193 ATGGCTTCCTGTGACGACGACTTCTCTCTCCTCAGCGATGAACACCACCACCAGCACCACCCGCCCAATCCCAATCACCACCATGTCCCTTCCTCTCATCACCTCCACCAGACCTACGCTAATCACCGGTTTGGTTCCCGACCCGCTCCGGTCCACACTCCTCCGCCGTCCCAGCCGATTCTCGCGCATTCCGAGAGTCCGAAGAAGATCAGCACCGGAGAAGAGGAAGAGGAGGACGGAGACGATTACGGCGAGGCGGCTTTTTGTTCGAATCCGTTTGATAATGGTACTGATCAGAGTAGAGTCGGGATCGGTGTTGATATGCGTGTAGAGAAAAGGAAGGATCTTGTGGAGGACCTCGGCGATGAAAATGCTTCGTACGGTTACAAAAAACCTAGATCCTCCGTCGTCGTTGGCGGTGAGTATAGGAAAGATAGGGAGGAGTGGAGCGACGCGGCGATATCTTGCCTTCTTGATGCGTATACAGAGAAGTTTACGCAGCTGAACAAGGGGAATCTGAGAGGGAGGGATTGGGAGGAGGTAGCGGCGACTGTGAGCGAACGGTGTGAGAAGCAGAGTAAGAGTGTCGAGCAGTGTAAGAACAAGGTAGACAACTTGAAGAAGAGGTATAAGTTGGAAAGGCATAGAATGAGTAATGGTGGCATTTCCGCTAGTCACTGGCCTTGGTTCAAGCAAATGGAGCAAATTGTTGGTAATTCCACGACAATGAAGATTTCGTCCGACGAAGATCGGAGTATGAGTTCATCTGGGAATACTCCGAGGCAATCGAAGAGATACACGGTGATGACTCCAAATACTTCCGGACCAATAAATAATTTGAAACCCAAAACCACATCTAGTCCACGATGGCGAAGAGTGGTGTTCAAAATCAGCGGTGCAGCTCTAGCTGGGACGGGTCCTAATAACATTGACTCAAAGGTGGCAATGCTGATTGCTAGAGAAGTTATGATGGCTTGCCGCCTTGGTGTCGAGGTTGCAATTGTTGTTGGAGGTCGAAACTTCTTTTGTGGAGACACATGGGTGACTGCGACAGGTTTAGATAGATGCACTGCATACCAAATTGGTATGATGGCCACTGTTATGAATTCTATTCTTATCCAATCAGCACTAGAGAAGATGGGAGTTCAGACTCGCATCCAATCCGCATTTACCCTGCAAGAGATTGCGGAACCATACAGTAGACAACGAGCTATTAGACATCTTGAAAAAGGCAGAGTTGTTATATTTGGTGGCATTGGTGCTGGTGCTGGAAATCCCCTCTTCTCCACTGATACGGCTGCAGCTCTTCGAGCATCAGAGATTCAAGCTGAGGCTGTCCTCAAGGGTACCAATGTGGATGGTGTGTATGACTGCAATTCCCAAGACAACAATTTTACATTCAAGCACATCTCCTTCAGGGAGTTGGTCTCTAGAGGTGCAACCTCCATGGACATGACATCTCTGACGTTCTGTGAAGAGAACAACATTCCTGTTGTTGTCTTTAATCTTCTTGAATCTGGAAACATTTCAAAAGCTTTATGTGGAGATCAGGTTGGCACGCTGATTGATCAAACTGGAAGAGTTAGCTAA 1590 48.24 MASCDDDFSLLSDEHHHQHHPPNPNHHHVPSSHHLHQTYANHRFGSRPAPVHTPPPSQPILAHSESPKKISTGEEEEEDGDDYGEAAFCSNPFDNGTDQSRVGIGVDMRVEKRKDLVEDLGDENASYGYKKPRSSVVVGGEYRKDREEWSDAAISCLLDAYTEKFTQLNKGNLRGRDWEEVAATVSERCEKQSKSVEQCKNKVDNLKKRYKLERHRMSNGGISASHWPWFKQMEQIVGNSTTMKISSDEDRSMSSSGNTPRQSKRYTVMTPNTSGPINNLKPKTTSSPRWRRVVFKISGAALAGTGPNNIDSKVAMLIAREVMMACRLGVEVAIVVGGRNFFCGDTWVTATGLDRCTAYQIGMMATVMNSILIQSALEKMGVQTRIQSAFTLQEIAEPYSRQRAIRHLEKGRVVIFGGIGAGAGNPLFSTDTAAALRASEIQAEAVLKGTNVDGVYDCNSQDNNFTFKHISFRELVSRGATSMDMTSLTFCEENNIPVVVFNLLESGNISKALCGDQVGTLIDQTGRVS 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 59963640 59966430 - Bda022362.1 Bda05g01193 7505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01193 529 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 1 529 IPR011817 GO:0006221|GO:0009041
Bda05g01193 529 Hamap Uridylate kinase [pyrH]. 288 523 IPR015963 GO:0005737|GO:0006221|GO:0033862
Bda05g01193 529 SUPERFAMILY Carbamate kinase-like 289 522 IPR036393 -
Bda05g01193 529 Coils Coil 189 216 - -
Bda05g01193 529 PANTHER URIDYLATE KINASE 1 529 - -
Bda05g01193 529 CDD AAK_UMPK-PyrH-Ec 291 523 IPR015963 GO:0005737|GO:0006221|GO:0033862
Bda05g01193 529 Gene3D - 281 528 IPR036393 -
Bda05g01193 529 MobiDBLite consensus disorder prediction 244 285 - -
Bda05g01193 529 MobiDBLite consensus disorder prediction 1 100 - -
Bda05g01193 529 Gene3D - 149 212 - -
Bda05g01193 529 Pfam Myb/SANT-like DNA-binding domain 146 236 IPR044822 -
Bda05g01193 529 Pfam Amino acid kinase family 292 502 IPR001048 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01193 Bda-Chr5:59963640 Bda11g01366 Bda-Chr11:16318360 2.12E-90 dispersed
Bda07g01204 Bda-Chr7:14422465 Bda05g01193 Bda-Chr5:59963640 8.38E-06 dispersed
Bda05g01193 Bda-Chr5:59963640 Bda01g00853 Bda-Chr1:40961499 3.78E-18 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15953 PF00696 AA_kinase 6.60E-24 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01193 - - csv:101222460 845.499