Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda05g01198 | ATGGAGCTTTTTCTTCTTCCTTGCCACCAAACTAGCCCTACTATCCTGCAGAAGCCTCTCTCCCTAATTCGCAATACAGGAAAGAGCAGTCCCAAGAGGAATTCACACGCCTTGCCATGTCGCTGTTCATGGTCATCCTCGGACTGTGAATTTACAGAACAAACTAAACAACCATTGCGAGGTGATGGACGGAGAGAATTGCTTGGCGCCATCCTATCAACTGCTGCCGGCGTTTATGTCTGTGATGTAGCAGAGGCCGTTAGCACAAGTCGAAGGGCTCTTAGAGGATCAAAAATACCTGAAAGTGAATTCACAACCCTCCCCAATGGTCTAAAGTACTATGATATCAAGGTCGGCGGTGGAATAAAGGCCGTGACTGGATCTCGTGTTGCGGTCCATTATGTTGCTAAGTGGAGAGGCATCACATTTATGACAAGCAGGCAAGGGATGGGTGTTGGTGGAGGAACGCCTTATGGATTCGATGTAGGCCAATCTGAAAGAGGGTCAGTGCTCAAAGGATTAGATTTAGGTGTACAAGGCATGAGGGTGGGAGGGCAGAGACTGCTAATAGTTCCTCCTGAGCTAGCATATGGAAGCAAAGGAGTTCAGGAGATTCCCCCTAATGCAACCATTGAGGTAGAATTTCATCATATAATTTCCCAAACTTTCTGCAATTAA | 678 | 46.9 | MELFLLPCHQTSPTILQKPLSLIRNTGKSSPKRNSHALPCRCSWSSSDCEFTEQTKQPLRGDGRRELLGAILSTAAGVYVCDVAEAVSTSRRALRGSKIPESEFTTLPNGLKYYDIKVGGGIKAVTGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGQSERGSVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNATIEVEFHHIISQTFCN | 225 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 59989282 | 59990927 | + | Bda022368.1 | Bda05g01198 | 7510 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda05g01198 | 225 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 127 | 221 | IPR001179 | GO:0003755 | |
| Bda05g01198 | 225 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 9 | 215 | - | - | |
| Bda05g01198 | 225 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC | 9 | 215 | - | - | |
| Bda05g01198 | 225 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 123 | 212 | IPR001179 | GO:0003755 | |
| Bda05g01198 | 225 | SUPERFAMILY | FKBP-like | 87 | 212 | - | - | |
| Bda05g01198 | 225 | Gene3D | - | 82 | 221 | IPR046357 | GO:0003755 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00041 | Bda-Chr1:5568618 | Bda05g01198 | Bda-Chr5:59989282 | 7.12E-15 | dispersed | |
| Bda05g01198 | Bda-Chr5:59989282 | Bda11g00983 | Bda-Chr11:9547832 | 1.64E-18 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda05g01198 | - | - | mdm:103423311 | 330.487 |