Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01201 ATGGCGGCCTTACTTTCCCTGTTATCGGCTTTAGCATCCGTTCTTGTGCTGGTGTCGGTAGTGTACTGTGGTTTCTCGCCAGCCCTTCTCCATCTGGAGAGAGCTTTTCCGCTCGGTCAACCTGTGGAGCTCGATGGTCTCAGAGCTCGAGACAGAGTTAGGCATGCACGAATCTTGCAAGGTGTGCTCGGTGGTGTCGTCGACTTCTCAGTCGAAGGTTCCCCCGATCCATACCTCGTTGGGCTTTATTTTACCAAAGTGAAGTTAGGTTCTCCTCCGAGGGAATTCACTGTACAAATAGATTCGGGGAGTGACATATTATGGATTACTTGTAGTTCATGCAATGATTGCCCCCAATCAAGTGAACTTGGGATTCAACTAAATTTTTTCGACGTGGCCAGCTCATTAACTGCTGAACTGATCCCCTGCTCAGACACCATCTGCACTTCTCAATTTCAAACAACAGCTACTCAATGCTCTACCCAGAGTAATCAGTGCGGTTACACCTTCCAGTATGGTGATGGAAGTGGCACATCTGGTTTTTATGTATCCGATTCCTTGTACTTTGACATGATTCTGGGGCAATCTATGATTGCCAACTCCTCAGCCACGATTGTCTTTGGGTGTAGCACATATCAGTCTGGAGATTTGACTAAAACAGACAAAGCAATCGATGGTATTTTTGGGTTTGGTCCAGGGGATTTGTCTGTTATATCACAATTGTCATCTCAAGGAGTAACACCGAAGGTTTTCTCCCATTGTCTGAAAGGAGACGACCATGGAGGTGGAATATTGGTTCTTGGTGAGATTCTGGAGCCCAGTATTGTTTACAGTCCACTTGTTCCATCCCAGCCTCATTATAATTTATATCTTCAGAGCATTGCTGTTAATGGGAAACTGTTATCAATTGATCCATCAGTTTTTGCAACATCAATCAATCGAGGAACTATTGTAGACACTGGAACAACGCTCTCATATCTTGTCGAAGAAGCTTATGATCCGTTTGTCAGTACTATAACTTCTGCGGTTTCTCAATCGGTGTCTTTGATTATTTCGAAGGGGAACCAGTGTTATCTTGTCTCCACCAGTGTTGCCGAGATATTTCCTCTGGTGAGCTTAAACTTTGCTGGCGGAGTATCGATGATTTTGAAACCAGAAGATTATCTTATACATCTTGGGTTTTATGAGGGAGCTGCAATGTGGTGTATTGGGTTTCAGAAAGCTCAAGAAGGGATCACCATCTTAGGAGATCTTGTTCTTAAAGATAAAATCTTTGTTTACGATTTAGATCGCCGACGAATAGGGTGGGCAAACTACGATTGTTCACTCTCTGTAAATGTCTCTGTAACTTCGAGCAAGGACGAGTTCATCAATGCAGGTCAGCTGACTGTGAGTAGCTCATCTAAAGATAACCTCTTTGACATTGAGTTTCTTCCCATCAAAATTTTCCCGCTGCTGGCCTCGGCCATGGCACTCGGAATTCCAAGATGA 1491 44.2 MAALLSLLSALASVLVLVSVVYCGFSPALLHLERAFPLGQPVELDGLRARDRVRHARILQGVLGGVVDFSVEGSPDPYLVGLYFTKVKLGSPPREFTVQIDSGSDILWITCSSCNDCPQSSELGIQLNFFDVASSLTAELIPCSDTICTSQFQTTATQCSTQSNQCGYTFQYGDGSGTSGFYVSDSLYFDMILGQSMIANSSATIVFGCSTYQSGDLTKTDKAIDGIFGFGPGDLSVISQLSSQGVTPKVFSHCLKGDDHGGGILVLGEILEPSIVYSPLVPSQPHYNLYLQSIAVNGKLLSIDPSVFATSINRGTIVDTGTTLSYLVEEAYDPFVSTITSAVSQSVSLIISKGNQCYLVSTSVAEIFPLVSLNFAGGVSMILKPEDYLIHLGFYEGAAMWCIGFQKAQEGITILGDLVLKDKIFVYDLDRRRIGWANYDCSLSVNVSVTSSKDEFINAGQLTVSSSSKDNLFDIEFLPIKIFPLLASAMALGIPR 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 60003121 60006353 - Bda022371.1 Bda05g01201 7513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01201 496 CDD pepsin_A_like_plant 83 441 IPR034161 -
Bda05g01201 496 ProSiteProfiles Peptidase family A1 domain profile. 83 437 IPR033121 -
Bda05g01201 496 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 459 - -
Bda05g01201 496 Gene3D Acid Proteases 270 448 IPR021109 -
Bda05g01201 496 PANTHER ASPARTYL PROTEASES 5 459 IPR001461 GO:0004190|GO:0006508
Bda05g01201 496 PRINTS Pepsin (A1) aspartic protease family signature 413 428 IPR001461 GO:0004190|GO:0006508
Bda05g01201 496 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Bda05g01201 496 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Bda05g01201 496 Pfam Xylanase inhibitor C-terminal 286 437 IPR032799 -
Bda05g01201 496 Pfam Xylanase inhibitor N-terminal 83 268 IPR032861 -
Bda05g01201 496 Gene3D Acid Proteases 68 269 IPR021109 -
Bda05g01201 496 SUPERFAMILY Acid proteases 78 444 IPR021109 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00372 Bda05g01201 CCT
Bda01g00372 Bda05g01201 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00372 Bda-Chr1:29588154 Bda05g01201 Bda-Chr5:60003121 0 dispersed
Bda05g01201 Bda-Chr5:60003121 Bda07g01139 Bda-Chr7:13521645 3.03E-109 dispersed
Bda02g00723 Bda-Chr2:48059873 Bda05g01201 Bda-Chr5:60003121 6.10E-49 wgd
Bda05g01201 Bda-Chr5:60003121 Bda09g01430 Bda-Chr9:46129669 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01201 - - csv:101204039 737.258