Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g01212 | GGAGGACCGGAGGAGGCCACTCATCCCGACGCGTTGAAGGCTGCGTTGGCCGAGTTCTTTTCAACGTTGATTTTCGTTTTCGCTGGCCAAGGTTCCGGCATGGCCTTCTCTAAGCTGACGAACGACGGCTCTGCTACCCCATCTGGCCTCATTGCGGCCTCTCTCGCTCATGGGTTTGGCCTTTTTGTGGCCGTGTCCGTCGGTGCGAATATCTCCGGCGGCCATGTTAACCCTGCTGTCACCTTCGGAGCATTCGTCGGAGGTAACATCACTCTTTTACGTGCCATTCTTTATTGGATCGGCCAACTTCTCGGGTCAACCGTCGCCTGTTTGCTCCTCTGGTTCGTCACTGACATGTCTACAACAGCTTTCTCTCTGTCATCCGGCGTGGGAGTTTGGAACGCAGTCGTTTTCGAAATTGTGATGACATTCGGATTAGTCTACACAGTTTACGCCACCGCCATCGATCCCAAGAAGGGCAACCTGGGAACCATTGCTCCGATTGCCATTGGTTTGATCGTGGGCGCTAACATTTTAGTCGGCGGAGCTTTCGACGGAGCCTCCATGAACCCAGCCGTGTCTTTTGGCCCAGCCTTGGTTAGCTGGACATGGAAAAACCAATGGGTCTACTGGGTCGGACCACTCATCGGTGGCGGCTTAGCCGGTATAGTGTACGAGTTCTTCTTTATCAACCGTAGCCACGAGCAGCTTCCGACAACCGACTATTAG | 729 | 54.18 | GGPEEATHPDALKAALAEFFSTLIFVFAGQGSGMAFSKLTNDGSATPSGLIAASLAHGFGLFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRAILYWIGQLLGSTVACLLLWFVTDMSTTAFSLSSGVGVWNAVVFEIVMTFGLVYTVYATAIDPKKGNLGTIAPIAIGLIVGANILVGGAFDGASMNPAVSFGPALVSWTWKNQWVYWVGPLIGGGLAGIVYEFFFINRSHEQLPTTDY | 242 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 60068461 | 60069573 | + | Bda022382.1 | Bda05g01212 | 7524 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g01212 | 242 | Gene3D | Glycerol uptake facilitator protein. | 2 | 242 | IPR023271 | - | |
Bda05g01212 | 242 | Pfam | Major intrinsic protein | 6 | 225 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda05g01212 | 242 | ProSitePatterns | MIP family signature. | 75 | 83 | IPR022357 | - | |
Bda05g01212 | 242 | CDD | MIP | 13 | 228 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda05g01212 | 242 | PANTHER | AQUAPORIN TIP1-1 | 2 | 242 | - | - | |
Bda05g01212 | 242 | SUPERFAMILY | Aquaporin-like | 5 | 237 | IPR023271 | - | |
Bda05g01212 | 242 | PRINTS | Major intrinsic protein family signature | 94 | 113 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda05g01212 | 242 | PRINTS | Major intrinsic protein family signature | 138 | 156 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda05g01212 | 242 | PRINTS | Major intrinsic protein family signature | 57 | 81 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda05g01212 | 242 | PRINTS | Major intrinsic protein family signature | 208 | 228 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda05g01212 | 242 | PRINTS | Major intrinsic protein family signature | 13 | 32 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda05g01212 | 242 | PRINTS | Major intrinsic protein family signature | 171 | 193 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda05g01212 | 242 | PANTHER | AQUAPORIN-8 | 2 | 242 | IPR034294 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda05g01212 | Bda-Chr5:60068461 | Bda03g00743 | Bda-Chr3:6309940 | 2.53E-36 | dispersed | |
Bda06g00829 | Bda-Chr6:11556594 | Bda05g01212 | Bda-Chr5:60068461 | 1.01E-46 | transposed | |
Bda07g00601 | Bda-Chr7:7353841 | Bda05g01212 | Bda-Chr5:60068461 | 6.76E-128 | transposed | |
Bda13g01334 | Bda-Chr13:35622513 | Bda05g01212 | Bda-Chr5:60068461 | 1.82E-81 | transposed | |
Bda01g00315 | Bda-Chr1:28262176 | Bda05g01212 | Bda-Chr5:60068461 | 8.16E-120 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g01212 | K09873 | - | pvy:116107287 | 430.254 |