Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01212 GGAGGACCGGAGGAGGCCACTCATCCCGACGCGTTGAAGGCTGCGTTGGCCGAGTTCTTTTCAACGTTGATTTTCGTTTTCGCTGGCCAAGGTTCCGGCATGGCCTTCTCTAAGCTGACGAACGACGGCTCTGCTACCCCATCTGGCCTCATTGCGGCCTCTCTCGCTCATGGGTTTGGCCTTTTTGTGGCCGTGTCCGTCGGTGCGAATATCTCCGGCGGCCATGTTAACCCTGCTGTCACCTTCGGAGCATTCGTCGGAGGTAACATCACTCTTTTACGTGCCATTCTTTATTGGATCGGCCAACTTCTCGGGTCAACCGTCGCCTGTTTGCTCCTCTGGTTCGTCACTGACATGTCTACAACAGCTTTCTCTCTGTCATCCGGCGTGGGAGTTTGGAACGCAGTCGTTTTCGAAATTGTGATGACATTCGGATTAGTCTACACAGTTTACGCCACCGCCATCGATCCCAAGAAGGGCAACCTGGGAACCATTGCTCCGATTGCCATTGGTTTGATCGTGGGCGCTAACATTTTAGTCGGCGGAGCTTTCGACGGAGCCTCCATGAACCCAGCCGTGTCTTTTGGCCCAGCCTTGGTTAGCTGGACATGGAAAAACCAATGGGTCTACTGGGTCGGACCACTCATCGGTGGCGGCTTAGCCGGTATAGTGTACGAGTTCTTCTTTATCAACCGTAGCCACGAGCAGCTTCCGACAACCGACTATTAG 729 54.18 GGPEEATHPDALKAALAEFFSTLIFVFAGQGSGMAFSKLTNDGSATPSGLIAASLAHGFGLFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRAILYWIGQLLGSTVACLLLWFVTDMSTTAFSLSSGVGVWNAVVFEIVMTFGLVYTVYATAIDPKKGNLGTIAPIAIGLIVGANILVGGAFDGASMNPAVSFGPALVSWTWKNQWVYWVGPLIGGGLAGIVYEFFFINRSHEQLPTTDY 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 60068461 60069573 + Bda022382.1 Bda05g01212 7524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01212 242 Gene3D Glycerol uptake facilitator protein. 2 242 IPR023271 -
Bda05g01212 242 Pfam Major intrinsic protein 6 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g01212 242 ProSitePatterns MIP family signature. 75 83 IPR022357 -
Bda05g01212 242 CDD MIP 13 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g01212 242 PANTHER AQUAPORIN TIP1-1 2 242 - -
Bda05g01212 242 SUPERFAMILY Aquaporin-like 5 237 IPR023271 -
Bda05g01212 242 PRINTS Major intrinsic protein family signature 94 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g01212 242 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g01212 242 PRINTS Major intrinsic protein family signature 57 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g01212 242 PRINTS Major intrinsic protein family signature 208 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g01212 242 PRINTS Major intrinsic protein family signature 13 32 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g01212 242 PRINTS Major intrinsic protein family signature 171 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g01212 242 PANTHER AQUAPORIN-8 2 242 IPR034294 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01212 Bda-Chr5:60068461 Bda03g00743 Bda-Chr3:6309940 2.53E-36 dispersed
Bda06g00829 Bda-Chr6:11556594 Bda05g01212 Bda-Chr5:60068461 1.01E-46 transposed
Bda07g00601 Bda-Chr7:7353841 Bda05g01212 Bda-Chr5:60068461 6.76E-128 transposed
Bda13g01334 Bda-Chr13:35622513 Bda05g01212 Bda-Chr5:60068461 1.82E-81 transposed
Bda01g00315 Bda-Chr1:28262176 Bda05g01212 Bda-Chr5:60068461 8.16E-120 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01212 K09873 - pvy:116107287 430.254