Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g01234 | GCATCCAATAGGGGTCAAGGTGGCATCCAGCAATTGCTAGCTGCTGAACAAGAAGCTCAACACATAGTTAATGCCGCAAGAAATGGGAAAATGGCTAGACTAAAACAGGCCAAGGATGAGGCTGAGAAGGAGGTTGCAGAATATCGTGCTCAAGTGGAGTATGAGTTCCAGAAGAAACTCACTGAGAGTAGTGGAGACTCGGGGGCAAATGTCAAGCGGCTCGAACAAGAGACTGATGAAAAGATCCATCACTTGAAGAATGAGGCCTCGAGAATTTCGCATGATGTGGTCAGCATGCTCCTCAAACAGGTGACGACCGTGAGAAAT | 327 | 47.71 | ASNRGQGGIQQLLAAEQEAQHIVNAARNGKMARLKQAKDEAEKEVAEYRAQVEYEFQKKLTESSGDSGANVKRLEQETDEKIHHLKNEASRISHDVVSMLLKQVTTVRN | 109 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 60220801 | 60221601 | + | Bda033684 | Bda05g01234 | 7546 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g01234 | 109 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT G1 | 1 | 109 | - | - | |
Bda05g01234 | 109 | Gene3D | - | 1 | 109 | - | - | |
Bda05g01234 | 109 | Coils | Coil | 24 | 58 | - | - | |
Bda05g01234 | 109 | TIGRFAM | V_ATP_synt_G: V-type ATPase, G subunit | 6 | 108 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 | |
Bda05g01234 | 109 | Pfam | Vacuolar (H+)-ATPase G subunit | 6 | 107 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 | |
Bda05g01234 | 109 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT G | 1 | 109 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda05g01231 | Bda-Chr5:60200982 | Bda05g01234 | Bda-Chr5:60220801 | 3.13E-75 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g01234 | K02152 | - | thj:104802409 | 181.415 |