Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01234 GCATCCAATAGGGGTCAAGGTGGCATCCAGCAATTGCTAGCTGCTGAACAAGAAGCTCAACACATAGTTAATGCCGCAAGAAATGGGAAAATGGCTAGACTAAAACAGGCCAAGGATGAGGCTGAGAAGGAGGTTGCAGAATATCGTGCTCAAGTGGAGTATGAGTTCCAGAAGAAACTCACTGAGAGTAGTGGAGACTCGGGGGCAAATGTCAAGCGGCTCGAACAAGAGACTGATGAAAAGATCCATCACTTGAAGAATGAGGCCTCGAGAATTTCGCATGATGTGGTCAGCATGCTCCTCAAACAGGTGACGACCGTGAGAAAT 327 47.71 ASNRGQGGIQQLLAAEQEAQHIVNAARNGKMARLKQAKDEAEKEVAEYRAQVEYEFQKKLTESSGDSGANVKRLEQETDEKIHHLKNEASRISHDVVSMLLKQVTTVRN 109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 60220801 60221601 + Bda033684 Bda05g01234 7546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01234 109 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 109 - -
Bda05g01234 109 Gene3D - 1 109 - -
Bda05g01234 109 Coils Coil 24 58 - -
Bda05g01234 109 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 6 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Bda05g01234 109 Pfam Vacuolar (H+)-ATPase G subunit 6 107 IPR005124 GO:0016471|GO:0046961|GO:1902600
Bda05g01234 109 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01231 Bda-Chr5:60200982 Bda05g01234 Bda-Chr5:60220801 3.13E-75 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01234 K02152 - thj:104802409 181.415