Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g01245 ATGGAGACTTGGCTTCTCGTTTTCTCTCTTTTGCTCTTCGTCAACCTCTCCTTCGCTCAGAGGCCAGGGTTTTTAAGTTTGGACTGTGGAGGTGAAGAAAGTTTCACTGATGAAATTGGTCTAGAATGGAGTCCGGATGATCAACTTCATTATGGAGAGAAGACAAATATATCGGTTGTAAATGAGACACGAAAGCAATACAAGACAGTTAGAGTTTTTCCGGCTGATTCGAGGAAGTACTGTTATATGCTTAACGTTATAAGTAGGACTAGGTACCTTGTCAGAGCATCATTCTTGTATGGAAACTTTGATGAAAATAATGTTTATCCAAAATTTGACATTTCTCTCGGAGCAACACATTGGTCAACGATTGTCATATCCGACGCTAATACAATAGAGGTCAGAGAGCTAATATTTTTAGCAACAAGTCCTACAACGAGTGTGTGCTTATCCAATGCCACAACTGGACAACCATTTATATCCACTCTTGAGCTCCGACAATTTAATGGCTCAATTTATTACACAGAGTTTGAAAATCAGTTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGATTCAGAAGCTCCAGTGAGGCATCCTGATGACCCATTTGATCGTCTATGGGAGTCAGACTCTGTAAAAAGAGCAAACTACCTTGTTGATGTTGCTGCTGGTACTGAAAAAGTGTCAACTAAAAAGCCAATCTATGTCGACATAGATACCAGACCACCCGAAAAGGTTATGCAAACGGCTGTTGTTGGTAGAAATGGGTCGTTAACTTATCGGTTGAATTTGGATGGTTTTCCTGGTTTTGGATGGGCAGTCACCTATTTTGCGGAAATTGAAGATTTGAGTTCAAAGGATTCCCGAAAATTCAGGCTGCTACTACCAGGTTCCCCTGAACTCAGCAAAGCGGTCGTGAACATTGAGGAGAATGCGCAGGGGAAATATCGACTCTATGAACCAGGATTTACAAACCTATCCCTTCCCTTTGTTTTGTCTTTTAGATTTGGAAAAACATCAGACTCTTCCTTGGGGCCCCTTCTAAATGCCATGGAGATTAATAAGTATCTTGAGAAGAATGAAGGTTCTACGGATCAGACAGTTATTACTGATGTTGTTGCACAGTATTCCTCAGTAGGCTGGGATGAAGAAGGTGGAGATCCATGTTTGCCTGTGCCATGGTCATGGTTGTTGTGTAACACAAATCGACGACCACAAATAATTAAAATTTCATTATCTAAGAGGAATTTGACGGGGAGCATCCCTTCAGACTTGGCAAAGCTGCAGGGTTTAGTTGAATTATGGCTTGATGGGAATTCATTAGTTGGTTCAATACCCGATTTTACTGGATGTGTGGACCTGAAGATCCTGCATCTCGAGAATAATCAGTTGACTGGAGATCTGCCTTCCTCTTTATTGAATCTACCAAATTTAAGGGAGCTGTATGTGCAAAACAACATGTTATCAGGAAGAGTACCACCTGGTCTTCTCAGTAAAAACTTGGTTGTTGACTTCTCTGGAAATATCAATCTCAGTACGCAAGGTGGAAAAAAAATTCATGCAAATATAATTATAGCTTCAGCAGTTGGTGTTGCTGTCCTGCTGATAGCTACAATAGTTGCATGTTTATGCTTGCGGAAAGGCAGAAAAAATAAAAAACATAGTTTGCAAGCTTCTTTTAGGCAATCTCTGCCTGTGCAGAGGCTAGTTTCTTCTAATGGTGATGCACCAAAAGATGCAGCACACTGTTTCAGTGTTGATGAAATTGAAGACGCCACAAGAAATTTTGAGAGGAAAATTGGGTCAGGAGGTTTTGGGGTGGTATACTATGGTAAATTACATGATGGAAAAGAAATTGCCGTTAAAGTCCTGACCAATAATTCTTTCCAAGGAAAGCGAGAATTTTCAAACGAGGTGACCCTTTTGTCAAGGATTCATCACAGAAACCTTGTACAATTTCTCGGATATTCTCAAGAAGAAGGGAGGAGCATGCTTGTTTATGAGTTCATGCATAGCGGAACTCTCAAGGAGCATCTCTATGGCCCATTAACACATGAACGAAGTATGAATTGGATTAAGCGGCTTGAGATTGCTGAAGATGCAGCCAGAGGGATCGAGTATCTTCACACAGGGTGTGTACCTGCGATCATTCACAGGGACTTGAAAAGCAGCAACATTCTTTTAGACATGCACATGAAAGCCAAGGTTTCAGATTTTGGGCTTTCTAAGCTTGCAGTGGATGGTGCCTCCCATGTCTCTAGCATTGTTCGAGGAACGGTCGGTTATTTGGATCCAGAATATTACATATCACAACAGTTAACCGACAAGAGTGACGTTTATAGTTTTGGGGTGATTCTTCTCGAGTTGATATCAGGTCAGGAGGCCATATCGAACACTTTTGGTGTCAACTGCCGCAACATAGTACAATGGGCCAAGTTACATATCGAGAGCGGAGATATCCAAGGGATAATTGATCCATCACTGTGTAACGAGTACGATATTCAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTGAGGCCTCATGGAAGTACGAGGCCATCCATCTCAGAAGTGCTGAAGGAGATTCAGGATGCGCTGTCGATCGAAAGGGTAGGCAGGGGAGGGAACTCCAACTCAGACGATTTATCCACGCACTCCATCCACTCTTGTATCAACACGGGGTCGCTTGATTTTGTGGGAATTGAGAATTTCATGTCGTTCAATGAATCTATCGCCCTACCCACTGCTAGATAG 2772 41.88 METWLLVFSLLLFVNLSFAQRPGFLSLDCGGEESFTDEIGLEWSPDDQLHYGEKTNISVVNETRKQYKTVRVFPADSRKYCYMLNVISRTRYLVRASFLYGNFDENNVYPKFDISLGATHWSTIVISDANTIEVRELIFLATSPTTSVCLSNATTGQPFISTLELRQFNGSIYYTEFENQFYLSVSARINFGADSEAPVRHPDDPFDRLWESDSVKRANYLVDVAAGTEKVSTKKPIYVDIDTRPPEKVMQTAVVGRNGSLTYRLNLDGFPGFGWAVTYFAEIEDLSSKDSRKFRLLLPGSPELSKAVVNIEENAQGKYRLYEPGFTNLSLPFVLSFRFGKTSDSSLGPLLNAMEINKYLEKNEGSTDQTVITDVVAQYSSVGWDEEGGDPCLPVPWSWLLCNTNRRPQIIKISLSKRNLTGSIPSDLAKLQGLVELWLDGNSLVGSIPDFTGCVDLKILHLENNQLTGDLPSSLLNLPNLRELYVQNNMLSGRVPPGLLSKNLVVDFSGNINLSTQGGKKIHANIIIASAVGVAVLLIATIVACLCLRKGRKNKKHSLQASFRQSLPVQRLVSSNGDAPKDAAHCFSVDEIEDATRNFERKIGSGGFGVVYYGKLHDGKEIAVKVLTNNSFQGKREFSNEVTLLSRIHHRNLVQFLGYSQEEGRSMLVYEFMHSGTLKEHLYGPLTHERSMNWIKRLEIAEDAARGIEYLHTGCVPAIIHRDLKSSNILLDMHMKAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNTFGVNCRNIVQWAKLHIESGDIQGIIDPSLCNEYDIQSMWKIAEKALMCVRPHGSTRPSISEVLKEIQDALSIERVGRGGNSNSDDLSTHSIHSCINTGSLDFVGIENFMSFNESIALPTAR 923
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 60314525 60321615 - Bda022409.1 Bda05g01245 7557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g01245 923 ProSiteProfiles Protein kinase domain profile. 597 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g01245 923 Gene3D Ribonuclease Inhibitor 367 524 IPR032675 -
Bda05g01245 923 SUPERFAMILY Protein kinase-like (PK-like) 584 866 IPR011009 -
Bda05g01245 923 SUPERFAMILY L domain-like 395 511 - -
Bda05g01245 923 PANTHER TYROSINE KINASE DOMAIN PROTEIN 10 900 - -
Bda05g01245 923 SMART serkin_6 597 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g01245 923 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Bda05g01245 923 PANTHER OS07G0107800 PROTEIN-RELATED 10 900 - -
Bda05g01245 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Bda05g01245 923 Gene3D Transferase(Phosphotransferase) domain 1 673 885 - -
Bda05g01245 923 Pfam Protein tyrosine and serine/threonine kinase 599 801 IPR001245 GO:0004672|GO:0006468
Bda05g01245 923 Pfam Malectin-like domain 27 357 IPR024788 -
Bda05g01245 923 Gene3D Phosphorylase Kinase; domain 1 573 672 - -
Bda05g01245 923 CDD STKc_IRAK 603 869 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00912 Bda-Chr4:58891441 Bda05g01245 Bda-Chr5:60314525 7.85E-139 dispersed
Bda05g01245 Bda-Chr5:60314525 Bda10g00956 Bda-Chr10:43874893 0 dispersed
Bda10g00843 Bda-Chr10:42829620 Bda05g01245 Bda-Chr5:60314525 1.28E-45 dispersed
Bda01g01716 Bda-Chr1:53232070 Bda05g01245 Bda-Chr5:60314525 5.90E-31 transposed
Bda13g00288 Bda-Chr13:3617508 Bda05g01245 Bda-Chr5:60314525 6.41E-72 transposed
Bda03g01735 Bda-Chr3:56779740 Bda05g01245 Bda-Chr5:60314525 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69651 PF12819 Malectin_like 4.90E-74 CL0202 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g01245 - - csv:101212456 1466.44