Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g01256 | ATGTATCATCACAATCATCTACAACAGCAGCAGCAACATCAAGGAAAGAACATACACTCTTCTACAAAGATGCCCCTAATTCCAGAGAGACACTTTATTGTGCAAGGTGCTAATGGCCCTGGAGATTCAGGACTTGTGCTCTCCACTGACGCCAAGCCTCGTTTAAAGTGGACCCACGAACTCCATGAGCGTTTCATTGAAGCAGTCTGTCAGCTTGGTGGAGCTGAGAAAGCAACACCCAAGACTGTGATGAAAGTAATGGGTATACCTGGACTTACTTTGTATCACTTAAAGAGTCATCTTCAGAAGTACAGGCTGAGCAAGAACGTGCATGGGCAACCTAATAGCGAGACCAACAAAATTGGTGCGGTTGCAGTGGCTGAAAGCAGACTGATAGAAGCCAACAGAAGTCACACCGACAACTTCAGTGCTGCGTCTCAGACCAACAATTGCAGTGGGGTTGGGAACTCAAGAAGCTTAGAGATAAGTGAAGCTCTACAGATGCAAATTGAAGTGCAGAGAAGGCTGCACGAGCAGCTTGAGGTACAGCGACACCTGCAGCTGAGGATAGAAGCCCAGGGAAAGTACCTGCAGTCGGTGTTAGAGAAAGCGCAGGAGACGTTAGGAAGGCAGAACATCGGCGCCGTCGGACTTGAAACCGCCAAGGTCCAACTATCAGAGCTGGTTTCGAAAGTATCAATGCAGTGCCTCGCCGGTGAATTTCCGGAGCTGCAGAGGCTTTACCCCCAGTCCGTCCAACCTCCGGATGGCTCATTTGAGAGCTGTCTGACATGCTGCGAAGGATCCCTGACGGACCCCGAATTACACAACGGGAGTTTGGGTAATGTTGGCGGCGTTCGGTTGGACACAAAAGATAATGCGGAAGGGTGGAGTGAGGTCCTGAAAGAGACGGTGTTTTTGTCTTCGATGGGGAAGGTAGGCGAAAGATCAAACAGGAGAAGTGGCGGAGACTTGTCGATGAATATCGGGCGGTATCTAGAGGAAAAGGAGGGAAGCAACGACGTGATGAGGGAAGGAGGGTCCCAGTGGAAGGGAGGGAGAGTCAGAAGAAGAGAGGAAAGCTTCTGGAAGAGGGAGGAGTCAGTGAAAGAGAAACAAGGAGAGAAGGAGAAAGGGTGGTCAACGGCCCTGGACCTGAATGCGGGGGAGGATGAAAATGGAAGCTGTTCGGAAAGCAAGCAGCTGGACTTGAATGGGTTCAGCTGGGACTAG | 1233 | 50.61 | MYHHNHLQQQQQHQGKNIHSSTKMPLIPERHFIVQGANGPGDSGLVLSTDAKPRLKWTHELHERFIEAVCQLGGAEKATPKTVMKVMGIPGLTLYHLKSHLQKYRLSKNVHGQPNSETNKIGAVAVAESRLIEANRSHTDNFSAASQTNNCSGVGNSRSLEISEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNIGAVGLETAKVQLSELVSKVSMQCLAGEFPELQRLYPQSVQPPDGSFESCLTCCEGSLTDPELHNGSLGNVGGVRLDTKDNAEGWSEVLKETVFLSSMGKVGERSNRRSGGDLSMNIGRYLEEKEGSNDVMREGGSQWKGGRVRRREESFWKREESVKEKQGEKEKGWSTALDLNAGEDENGSCSESKQLDLNGFSWD | 410 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 60368937 | 60370745 | + | Bda022420.1 | Bda05g01256 | 7568 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g01256 | 410 | MobiDBLite | consensus disorder prediction | 361 | 410 | - | - | |
Bda05g01256 | 410 | Pfam | Myb-like DNA-binding domain | 54 | 105 | IPR001005 | - | |
Bda05g01256 | 410 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 52 | 107 | IPR006447 | GO:0003677 | |
Bda05g01256 | 410 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 49 | 109 | IPR017930 | - | |
Bda05g01256 | 410 | MobiDBLite | consensus disorder prediction | 392 | 410 | - | - | |
Bda05g01256 | 410 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 10 | 409 | IPR044848 | GO:0003700 | |
Bda05g01256 | 410 | PANTHER | MYB-RELATED PROTEIN 2 | 10 | 409 | - | - | |
Bda05g01256 | 410 | Pfam | MYB-CC type transfactor, LHEQLE motif | 161 | 207 | IPR025756 | - | |
Bda05g01256 | 410 | Coils | Coil | 163 | 183 | - | - | |
Bda05g01256 | 410 | MobiDBLite | consensus disorder prediction | 361 | 379 | - | - | |
Bda05g01256 | 410 | Gene3D | - | 51 | 109 | - | - | |
Bda05g01256 | 410 | SUPERFAMILY | Homeodomain-like | 51 | 107 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda05g01256 | Bda-Chr5:60368937 | Bda11g00350 | Bda-Chr11:3890043 | 5.05E-59 | dispersed | |
Bda07g01469 | Bda-Chr7:27375516 | Bda05g01256 | Bda-Chr5:60368937 | 3.26E-17 | dispersed | |
Bda05g01256 | Bda-Chr5:60368937 | Bda13g00487 | Bda-Chr13:5755722 | 4.57E-60 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15961 | PF00249 | Myb_DNA-binding | 2.60E-07 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g01256 | - | - | cpap:110816961 | 430.639 |