Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00011 | ATGTATGGACAGAGTGGGTCGTCGGACTCCGATTTGGCGCATCTCGACTCGATTAGCCGGTATTTATTGGGAGAATCGGATTCGCATCGAGACGGTAAAGTGGTAGTTTCGGGTTCCGGTGAGGCTTTTGCCCGGAGCTCTAGTTTCAGTAGCTTGTATCCTTGCCTGACGGATAATTGGGGGGAGCTGCCACTGAAAGTAGACGACTCGGAGGATATGGTCCTTGCTGGAGTACTTCGCGACGCCGTAAATGTCGGTTGGGTACCGTCACTCACTTCACCGTCGCCGGAAATCGGGAAATTTGAACTTTCGTATGTGAAATCGGAGCCGGGGATCCTTTCTCCTCTGAACCAATTTCCGGACCAGAAGAATGTACAAACGATGCCGGCGGTGGTTCCGCCGAGAGGAAAGCATTACCGTGGGGTTCGACAGCGGCCGTGGGGAAAATTCGCCGCTGAAATTCGGGATTCGGCGAAGAATGGGGCAAGGGTTTGGCTCGGAACCTTCGAGACTGCTGAGGATGCAGCTTTAGCTTACGACCGAGCGGCGTATCGGATGCGCGGCTCAAAAGCCTTACTTAACTTTCCTCTCCGGATTAACTCCGGTGAACCCGACCCGATTAGAGTGACGTCTAAGCGTTCTTCGCCGGAGCCATCGTCGTCCGCTGACAGTAGTGTATCATCGCCTAAAAGGCGGAAGAAAGCGAACGTCTCGTCACCTTCGCCAATCACGGCTCCCCAAGAAGGACAAATAAGTAAAATGACTGCGGTGGAAGAATTAAATGTAGTAAGCCACATAATGGTGTGCACACGTGGAGAAGAACTATTGGTCCGTTAG | 837 | 52.69 | MYGQSGSSDSDLAHLDSISRYLLGESDSHRDGKVVVSGSGEAFARSSSFSSLYPCLTDNWGELPLKVDDSEDMVLAGVLRDAVNVGWVPSLTSPSPEIGKFELSYVKSEPGILSPLNQFPDQKNVQTMPAVVPPRGKHYRGVRQRPWGKFAAEIRDSAKNGARVWLGTFETAEDAALAYDRAAYRMRGSKALLNFPLRINSGEPDPIRVTSKRSSPEPSSSADSSVSSPKRRKKANVSSPSPITAPQEGQISKMTAVEELNVVSHIMVCTRGEELLVR | 278 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 97555 | 98391 | - | Bda023176.1 | Bda06g00011 | 7593 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00011 | 278 | MobiDBLite | consensus disorder prediction | 203 | 250 | - | - | |
Bda06g00011 | 278 | PANTHER | DNA-BINDING DOMAIN | 37 | 235 | IPR044808 | GO:0003700|GO:0009873 | |
Bda06g00011 | 278 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED | 37 | 235 | - | - | |
Bda06g00011 | 278 | SMART | rav1_2 | 138 | 202 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00011 | 278 | PRINTS | Ethylene responsive element binding protein signature | 139 | 150 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00011 | 278 | PRINTS | Ethylene responsive element binding protein signature | 162 | 178 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00011 | 278 | CDD | AP2 | 137 | 196 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00011 | 278 | ProSiteProfiles | AP2/ERF domain profile. | 138 | 196 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00011 | 278 | MobiDBLite | consensus disorder prediction | 212 | 250 | - | - | |
Bda06g00011 | 278 | Pfam | AP2 domain | 138 | 188 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00011 | 278 | Gene3D | AP2/ERF domain | 137 | 199 | IPR036955 | GO:0003700|GO:0006355 | |
Bda06g00011 | 278 | SUPERFAMILY | DNA-binding domain | 138 | 198 | IPR016177 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00011 | Bda-Chr6:97555 | Bda08g00598 | Bda-Chr8:6108808 | 7.49E-160 | dispersed | |
Bda07g01785 | Bda-Chr7:33731127 | Bda06g00011 | Bda-Chr6:97555 | 6.80E-29 | dispersed | |
Bda13g00070 | Bda-Chr13:950161 | Bda06g00011 | Bda-Chr6:97555 | 2.86E-27 | dispersed | |
Bda06g00011 | Bda-Chr6:97555 | Bda06g00012 | Bda-Chr6:113617 | 5.03E-28 | tandem | |
Bda09g00741 | Bda-Chr9:12928612 | Bda06g00011 | Bda-Chr6:97555 | 1.39E-90 | transposed | |
Bda03g01040 | Bda-Chr3:9986747 | Bda06g00011 | Bda-Chr6:97555 | 1.44E-33 | wgd | |
Bda06g00011 | Bda-Chr6:97555 | Bda08g00597 | Bda-Chr8:6097599 | 4.53E-29 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15964 | PF00847 | AP2 | 1.90E-14 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00011 | K09286 | - | csv:101203663 | 307.76 |