Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00039 ATGTCATCTTCTCCGACTCCCCCCTTTTCTCCCGCTCTGGACCACCTTCCCCTCTCCGAGCAGCTATGTTATGTCCACTGCAATATTTGTGACACCGGCCTTGCGGTGAGTGTTCCTTGCACTAGTTTCTTCAAGACTGTGACAGTCCGATGCGGCCATTGCACTAACCTTTTGCCTCTGACTATGAGAGCTTTGCTTTTTCCTTCAAATAATCCTCAGTTTCATCAGCTGAATCAGCCTTTCTTCTCTCCTTCTCTCAATCTTCTGGAAGAGGTCCAGAATCCATCACCCAACTTTATGATCAGCCAAACAAGTGCAAATCCCTACCACTTTCCGCCTCGAGTATCTGATGAGGTTTCAAGAGCTCCTGTAATTAACAAACCTCCAGAGAAGAGACAAAGAGTTCCCTCTGCATATAACAGGTTCATCAAAGACGAAATTCAACGCATTAAATCAGTGAATCCCGATATATCACACAGAGAAGCTTTCAGCGCAGCAGCTAAGAACTGGGCCCACTTTCCCCATATTCAGTTCGGTCTCATACCTGATCAAACTCTGAATACGAAGACAAACATGCGACAGGTAATTGTCTCAAACACTTCAAAAACCCATCTCAATTACCTTAAAAACCACCTCAAAGAACAGTTATGA 651 44.7 MSSSPTPPFSPALDHLPLSEQLCYVHCNICDTGLAVSVPCTSFFKTVTVRCGHCTNLLPLTMRALLFPSNNPQFHQLNQPFFSPSLNLLEEVQNPSPNFMISQTSANPYHFPPRVSDEVSRAPVINKPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIQFGLIPDQTLNTKTNMRQVIVSNTSKTHLNYLKNHLKEQL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 403357 404932 - Bda023208.1 Bda06g00039 7621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00039 216 Pfam YABBY protein 19 180 IPR006780 GO:0007275
Bda06g00039 216 SUPERFAMILY HMG-box 124 174 IPR036910 -
Bda06g00039 216 PANTHER AXIAL REGULATOR YABBY 3 15 196 - -
Bda06g00039 216 Gene3D High mobility group box domain 120 177 IPR036910 -
Bda06g00039 216 PANTHER PROTEIN YABBY 6-RELATED 15 196 IPR006780 GO:0007275
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00039 Bda07g00010 CCT
Bda06g00039 Bda08g00564 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00039 Bda-Chr6:403357 Bda07g00010 Bda-Chr7:155652 9.28E-98 dispersed
Bda06g00039 Bda-Chr6:403357 Bda08g00564 Bda-Chr8:5726069 6.35E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15966 PF04690 YABBY 7.10E-67 CL0114 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00039 K25796 - zju:107403723 286.574