Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00039 | ATGTCATCTTCTCCGACTCCCCCCTTTTCTCCCGCTCTGGACCACCTTCCCCTCTCCGAGCAGCTATGTTATGTCCACTGCAATATTTGTGACACCGGCCTTGCGGTGAGTGTTCCTTGCACTAGTTTCTTCAAGACTGTGACAGTCCGATGCGGCCATTGCACTAACCTTTTGCCTCTGACTATGAGAGCTTTGCTTTTTCCTTCAAATAATCCTCAGTTTCATCAGCTGAATCAGCCTTTCTTCTCTCCTTCTCTCAATCTTCTGGAAGAGGTCCAGAATCCATCACCCAACTTTATGATCAGCCAAACAAGTGCAAATCCCTACCACTTTCCGCCTCGAGTATCTGATGAGGTTTCAAGAGCTCCTGTAATTAACAAACCTCCAGAGAAGAGACAAAGAGTTCCCTCTGCATATAACAGGTTCATCAAAGACGAAATTCAACGCATTAAATCAGTGAATCCCGATATATCACACAGAGAAGCTTTCAGCGCAGCAGCTAAGAACTGGGCCCACTTTCCCCATATTCAGTTCGGTCTCATACCTGATCAAACTCTGAATACGAAGACAAACATGCGACAGGTAATTGTCTCAAACACTTCAAAAACCCATCTCAATTACCTTAAAAACCACCTCAAAGAACAGTTATGA | 651 | 44.7 | MSSSPTPPFSPALDHLPLSEQLCYVHCNICDTGLAVSVPCTSFFKTVTVRCGHCTNLLPLTMRALLFPSNNPQFHQLNQPFFSPSLNLLEEVQNPSPNFMISQTSANPYHFPPRVSDEVSRAPVINKPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIQFGLIPDQTLNTKTNMRQVIVSNTSKTHLNYLKNHLKEQL | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 403357 | 404932 | - | Bda023208.1 | Bda06g00039 | 7621 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00039 | 216 | Pfam | YABBY protein | 19 | 180 | IPR006780 | GO:0007275 | |
Bda06g00039 | 216 | SUPERFAMILY | HMG-box | 124 | 174 | IPR036910 | - | |
Bda06g00039 | 216 | PANTHER | AXIAL REGULATOR YABBY 3 | 15 | 196 | - | - | |
Bda06g00039 | 216 | Gene3D | High mobility group box domain | 120 | 177 | IPR036910 | - | |
Bda06g00039 | 216 | PANTHER | PROTEIN YABBY 6-RELATED | 15 | 196 | IPR006780 | GO:0007275 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda06g00039 | Bda07g00010 | CCT | |
Bda06g00039 | Bda08g00564 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00039 | Bda-Chr6:403357 | Bda07g00010 | Bda-Chr7:155652 | 9.28E-98 | dispersed | |
Bda06g00039 | Bda-Chr6:403357 | Bda08g00564 | Bda-Chr8:5726069 | 6.35E-123 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15966 | PF04690 | YABBY | 7.10E-67 | CL0114 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00039 | K25796 | - | zju:107403723 | 286.574 |