Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00060 ATGAGAAGGCTGTGCTTATCTAGTCTTTCTCATTCTCTTTTCGTCTGCATTATGTTCTTTCATCAAATTATCATGATTTCACCAGCTACCGAAACCCAGATTTTGCTCCAATTCAAGAACAGCATCACTGAGGATCCGTTCAATAGTTTGAGAAATTGGGTATCTGGTGAAAACCCTTGTCAAAATTACAATGGCGTCTTCTGCAACTCTGCCGGATTTGTGGAGAAGATAGTTCTGTGGAACACTAGCTTGGCTGGAGTTCTGTCTCCTGCTCTAGCCGGATTAAAATCCTTGAGAACTTTGACACTGTTCGGAAACAGATTTTCTGGCAATATTCCCGACGAATATGGAGATATTCAAACCTTGTGGAAGCTCAATTTGAGTTCCAATGCATTATCTGGATCAATCCCGGAATTTCTCGGCGATTTGACAAACATAAGGTTTCTCGATTTGTCGAGAAATGGTTTCTCTGGAAATATACCGTCAGCTTTGTTCAAGCATTGTTACAAAACCAGGTATATTTCATTGTCTCAGAACAGTCTTTCTGGTGTGATTTCATCGTCAATTGTTAATTGTTTGAACCTCGAAGGGTTTGATTTTTCGTATAACAATATAAGTGGCGGAATTCCTTCGCAAATCTGTGACATTCCTGGCTTAAGATATGTTGTTTTGAGAGGTAATATGCTGTCAGGGAGTGTTGAGGCGCCATTTTTGAGCTGTCAAAGCTTGAATCTTCTGGATCTTGGAAGCAATTTCTTTACTGGATCAGCCCCATTTTCAGTTCTCAGCTCACAAAATATCACCTATTTCAATTTGTCAAACAATGGCTTCGAAGGGTCGATTCAAGCAATGTCTAATTGTGGTGATCGAATGGAGATTTTCGATATTTCGAGCAATGACTTTGTTGGAGAGATTCCACCAAGCATTTCCAAATGTCAAAACCTTAAGATCATGGATTTGGGTTATAACAAGCTGAATGGAACTATTCCAATGGAAATTACAGATCTGAAGATGCTTTTAGTGATTCGTTTGGGGAATAATTCGATTGGTGGATCGATTCCTGCAAATCTCGGAAATATCGAGGTGCTTCAAGTTTTGGATTTGCACAACCTCAATCTCGATGGAGAAATTCCGAGTAGTCTTAGCAGTTGCAGGTTTCTTCTTGAGCTGGATATTTCGAGTAATTATTTATACGGAGAAATTCCAGAGTCTCTTTACAACATGACGTATCTCGAAATCCTCGATATTCATCATAATCGTCTCAACGGAAGCATTCCTCAGAGTCTCGGAACATTATCAAAGCTTCAAACATTGGATCTTTCGGAGAACTTTCTATCCGGTTTGATTCCATCTTCGCTTGGCAATCTGACAATGTTGAGAAATTTCAATGTCTCCTTCAATAATCTTTCTGGGTCTATTCCTGCTATGATCTCACTTCAAGGTTTTGGACCTTCTTCATTTTCAAACAATCCATTTCTCTGTGGTGCTCCTCTGAATTCTTGCTCTGCAAATGGCAGTAATACGACCTCGAAGAAGAGCAAGGTTCTTAGCCCGTCTGCCATTGTCGCAATTGTGGCAGCTATCTTGATTCTTACTGGAGTTTGTGTGATTTCTGTTATGAATATCATGGCTCGACGGAGAAAAAAGGAACGAGAAGCAACAGTTATTGAGAGTACTCCACTGGGTTCAACCGATTCAAGTATTATTATCGGAAAACTGGTTCTTTTTAGTAAAAGTTTGCCTTCAAAGTATGAAGATTGGGAGACTGGCACTAAAGCTTTGTTGGATAAAGAGTGCCTGATAGGCGGAGGATCAATTGGAACGGTCTATCGAACTGATTTCGAGGGCGGGATTTCAATTGCAGTAAAAAAGCTCGAAACTCTCGGAAGAATCAGAAACCAAGAAGAGTTTGAGCAGGAAATAGGACGATTAGGATCCGTTCGACACCCAAATTTAGTCGCGTTTCAAGGATACTATTGGTCTTCGACAATGCAACTGATTCTATCGGAATTTCTCCCGAACGGAAACTTATACGAGAATCTCCACGGCCCAAACTTCGCCGGAACCAGCACCAGTACCGGAAATATCGAACTGTACTGGTCGAGAAGATTTCAGATCGCCGTCGGAACGGCAAGGGCCTTGGCTTATCTTCACCACGATTGTAAACCTGCAATTCTTCACCTCAACATCAAATCAACTAACATACTATTAGATGACAATTATGAGGCAAAGTTATCAGATTATGGGTTGGGAAAATTGCTTCCAATTTTAGATAACAACGTTCTTACCAAGTTTCATACTTCTGTCGGATATGTTGCCCCGGAATTAGTGCAGAGCTCGAGATTGAGCGAAAAATGCGATGTTTATAGCTATGGAGTAATTCTTTTAGAGCTGGTGACGGGAAGAAAGCCGGTGGAGAGTCCGAGGACTAACGAGGTTGTGATTTTGTGCGAGTTTGTGAGGGAGTATTTGGAAAGTGGGTCTCCTTCGGATTGTTTTGATCCGAATTTACAAGGATTCGAAGTGAACGAGCTCGTTCAAGTGATGAAATTGGGTTTGATTTGTTCGTCTGAAGTTGCTTCGAAGAGACCGAGCATGGCTGAAGTGGTTCAAGTTCTCGAGTCAATTAGAAATGGAATGGGATCATAG 2649 41.07 MRRLCLSSLSHSLFVCIMFFHQIIMISPATETQILLQFKNSITEDPFNSLRNWVSGENPCQNYNGVFCNSAGFVEKIVLWNTSLAGVLSPALAGLKSLRTLTLFGNRFSGNIPDEYGDIQTLWKLNLSSNALSGSIPEFLGDLTNIRFLDLSRNGFSGNIPSALFKHCYKTRYISLSQNSLSGVISSSIVNCLNLEGFDFSYNNISGGIPSQICDIPGLRYVVLRGNMLSGSVEAPFLSCQSLNLLDLGSNFFTGSAPFSVLSSQNITYFNLSNNGFEGSIQAMSNCGDRMEIFDISSNDFVGEIPPSISKCQNLKIMDLGYNKLNGTIPMEITDLKMLLVIRLGNNSIGGSIPANLGNIEVLQVLDLHNLNLDGEIPSSLSSCRFLLELDISSNYLYGEIPESLYNMTYLEILDIHHNRLNGSIPQSLGTLSKLQTLDLSENFLSGLIPSSLGNLTMLRNFNVSFNNLSGSIPAMISLQGFGPSSFSNNPFLCGAPLNSCSANGSNTTSKKSKVLSPSAIVAIVAAILILTGVCVISVMNIMARRRKKEREATVIESTPLGSTDSSIIIGKLVLFSKSLPSKYEDWETGTKALLDKECLIGGGSIGTVYRTDFEGGISIAVKKLETLGRIRNQEEFEQEIGRLGSVRHPNLVAFQGYYWSSTMQLILSEFLPNGNLYENLHGPNFAGTSTSTGNIELYWSRRFQIAVGTARALAYLHHDCKPAILHLNIKSTNILLDDNYEAKLSDYGLGKLLPILDNNVLTKFHTSVGYVAPELVQSSRLSEKCDVYSYGVILLELVTGRKPVESPRTNEVVILCEFVREYLESGSPSDCFDPNLQGFEVNELVQVMKLGLICSSEVASKRPSMAEVVQVLESIRNGMGS 882
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 618366 621096 + Bda023231.1 Bda06g00060 7642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00060 882 SMART LRR_typ_2 336 360 IPR003591 -
Bda06g00060 882 SMART LRR_typ_2 143 167 IPR003591 -
Bda06g00060 882 SMART LRR_typ_2 432 455 IPR003591 -
Bda06g00060 882 PANTHER UNNAMED PRODUCT 3 879 - -
Bda06g00060 882 Pfam Protein kinase domain 599 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00060 882 Gene3D Ribonuclease Inhibitor 91 286 IPR032675 -
Bda06g00060 882 Gene3D Ribonuclease Inhibitor 24 90 IPR032675 -
Bda06g00060 882 Gene3D Ribonuclease Inhibitor 385 502 IPR032675 -
Bda06g00060 882 Gene3D Phosphorylase Kinase; domain 1 570 671 - -
Bda06g00060 882 Gene3D Transferase(Phosphotransferase) domain 1 672 880 - -
Bda06g00060 882 Pfam Leucine rich repeat 410 469 IPR001611 GO:0005515
Bda06g00060 882 SUPERFAMILY L domain-like 38 162 - -
Bda06g00060 882 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Bda06g00060 882 Gene3D Ribonuclease Inhibitor 287 380 IPR032675 -
Bda06g00060 882 ProSiteProfiles Protein kinase domain profile. 595 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00060 882 PANTHER - 3 879 - -
Bda06g00060 882 SUPERFAMILY Protein kinase-like (PK-like) 596 874 IPR011009 -
Bda06g00060 882 SUPERFAMILY L domain-like 166 501 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00060 Bda-Chr6:618366 Bda15g00291 Bda-Chr15:5668759 7.70E-166 dispersed
Bda01g00845 Bda-Chr1:40600956 Bda06g00060 Bda-Chr6:618366 2.63E-09 transposed
Bda03g00050 Bda-Chr3:623551 Bda06g00060 Bda-Chr6:618366 2.07E-07 transposed
Bda11g00680 Bda-Chr11:6817680 Bda06g00060 Bda-Chr6:618366 1.68E-09 transposed
Bda03g01081 Bda-Chr3:10840197 Bda06g00060 Bda-Chr6:618366 7.21E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69653 PF00069 Pkinase 4.80E-35 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00060 - - jre:109010864 1270.76