Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00065 ATGTCTATCTCAGTAGCTTCGAGAGTAGAAAGCTTAGCAAGCAGTGGAATTCTGTCAATCCCAAAAGAGTACGTGAGGCCTCAAGAAGAACTCAACAGCATCGGAGACGTATTCGAAGAAGAAAGAAAACGCGAAGGACCTCAAGTACCCACCATAGATTTAAACGACATCGATTCAGAAGACCAGTCTGTGCGAGAAAAATGTCATCAGGAGCTCAAGAAGGCGGCCATGGATTGGGGAGTGATGCATCTGGTCAACCATGGAATTTCAGACGAGCTGATTGCTCGAGTGAAAGAGGCCGGAAGAGTGTTCTTCGATCAACCCATCGAGGAGAAAGAGAAATACGCAAATGATCAAGCTTCTGGTAAAATTCAAGGGTATGGCAGTAAGTTAGCTAATAATGCCAGTGGACAGCTCGAGTGGGAAGATTACTTCTTCCATCTTGTTTATCCTGAGGAGAAACGTGATTTGTCGATTTGGCCAAAGAATCCTACTGAGTACACAGAGGTGACGACAGAATATGCAAAACAACTGAGGATTTTAGCCACAAAAATCCTCTCAGTTCTCTCGATTGGGTTAGGATTAGAAGAAGGACGGCTAGAGAAAGAAGTAGGAGGGATAGAAGAGCTTCTTCTTATTTGGATCAATGAGGCCAAAAACCTTCCTAATATGGATATGTTTCATAAGACTTTAGGAGACGTGTTTTCAAAAGTTAGCAGCAAAATTGAAGGGCGTGTATCTAGTGCAATAACCAGTGATCCCTATGTGACTGTTTCTGTTTCTGGTGCTGTAATTGGAAGAACTTTTGTTATTCCTAACAGTGAAGACCCTGTTTGGAGGCAGCATTTTAATGTTCCTGTCGCACATTACGGATCAGAAGTGCAATTTGTAGTCAAAGACAATGATGTTGTGGGATCTCAGATCATAGGCGCTGTGGGTATTCCTGTGGAACAATTATACTCTGAGGTGAAAGTTGAAGGTATCTTTCCAATCCTTAATTCAGGAGGGAAGCCCTGCAAAGCTGGAGCTGTCTTGAGTTTATCGATTCAGTATATACCCATTAACAAGATAAACCTCTATGATGGTAGATTAGATTCATCTAATGATAGCCATGTTGTCTCTGCAACTTATTTTCCTCCTAGGAAAGGAGGCAAAGTTACACTATATCAAGACGCTCACGTCCATAATGATCTCCTTCCAAATATCAAGCTTTATGGTGGTTATAAGTACAATCATGGATCTTGTTGGCATGACGTCTTCAATGCCATAAATCAAGCGCGTCGTTTGATCTACATTACTGGTTGGTCTGTTTATCATGATGTTGGACTTGTTCGGGATGCTAATAATCCTGAGGATTATATTTTGGGAAATCTTCTCAAAGCCAAGTCACAAGAAGGTGTGAGAGTGTTGCTGCTTATATGGGATGATCCAACTTCTAAAAGCATTTTGGGATATAAAACGGATGGACTCATGGGAACAAACGATGAGGAAACTCGCCGGTTTTTCAAGCACTCCTCTGTCAAAGTGATTCTCTGTCCAAGGTCTGCCGGAAGTGGTCATAGCTGGGCTAAACAACAGAAACTCCCATATCTTTGTAATCATCTCTCTTTAATTAATGAAGATTTTTTTTATTACATTTTCTTAAAGTTTTGTATGGAAATCGCAATCCACATACAAAATGGAACAAAACTACTTTTCTTATATTTTGATAGTTCAAATTATGAACTAATTCCTGGTGGTCCGCGAGAGCCATGGCATGATTTGCATTGTCAAATTGATGGTCCAGCTGCATATGATGTCCTCACCAATTTTGAGGAGCGTTGGAGGAAGGCTTCTGAAGCTCATGGACTGAAGAAACTAAAATCATCAAATGATGATGCGTTACTCAAGATTGAACGAATTTCTGAAATCATTGGAGTAGAAGATGCATCTCGTCTAGGTATTGTTGATCCAGAAGGTTGGAATGTGCAGCTCAGGAAAGTTACTCATCTGTTGCACTTAATGATTATGATCTTACAGAACTTAGTATGTGGAAAGAACGTGCTCATAGACATGAGCATTCATGCAGCATATATCAGTGCAATACGAGCAGCACAACATTTTATTTACATCGAGAATCAGTATTTCCTAGGTTCTTCATACAATTGGAATTCTCACAAAGATTTAGGGGCAAACAATTTAATACCCATGGAAATCGCTCTTAAAATTGTGAACAAAATCAAAGCAAAAGAGAGGTTTTCTGCTTATATTGTTGTTCCTATGTGGCCAGAAGGCAATCCCACAAGCACACCTATCCAAAGAATTCTCTATTGGCAGAGAAAAACCATGCAGATGATGTATGAAATGATTTATAACGCTTTAAAGGAGGTTGGACTTGAGAATACATATGAGCCACAAGATTATTTGAATTTCTTTTGCCTCGGAAATCGAGAAGCATCAGATGGAGAGAGCACTGTTAAAGCTGGGAAATCTGGTGGCACAAAAACTCCTCAAGCACTAGCTCAGAGAGCTCGTCGCTTTATGATCTATGTCCACTCGAAAGGGATGATAGTGGACGACGAGTATGTAATTCTGGGATCTGCCAATATTAATCAGCGATCTATGGAAGGCACTAGAGACACAGAAATTGCTATGGGTGCATACCAGCCTCGTACAAACCAGTCTCGCCCACATGGTCAGCAGATATATGGGTATAGAATGTCATTATGGGCAGAGCACATGGGGACTTTGGAGCAATGTTTCGAGCAACCCGACACTGTCGAATGTATACGACGGGTTAGATCTTTGAGCGAGAAAAATTGGAGCCAATATGTAGGGGAGGAGCTGGTGGAAATGAGAGGCCATCTTCTCAAGTATCCGCTCGATGTTGATCGGGTGAAGCTACAACAGATGCCCCCGGGACACAGATATCTGCAAACAAATGCCAGTGACAGCGATGATGAAAGGCTGGAACGACGAAGACAGATGCCATACCACATGCACATAAACCTGGAGCTCCTTGAGGCGGTTCATCTCATATGTGCTATGTTACTGGAAGTCCCCAATTTGGCGTCTAACAACCATGAAGTGAAGCAGAAGGTCATCAGTAAGACTTTCCGGCGATTTCTCGAGGTCAGTGAGAGGCAGACATTCACCGGTCCTCCAGAAAATGTCAGAGATCATGTAATGGCTGCCACTAGGACTCTTAGTAAGGGAGACTTTCAAAGCACATTTGACACAATCTCATCCCTTGATGTGTGGAAACTCCTTCGGAATCGAGAAGTTGTTCTTGAGATGCTAAAGGCTAAGATCAAGGAAGAAGCCTTGAGGACTTACCTCTTCACCTACTCTTCCTCTTATGATTCTCTTAGTCTGACCCAGCTCACCAAAATGTTTGACCTCACGGAGGTTCAGGTGCACAGTATTGTCAGCAAGATGATGATAAATGAGGAGCTGCATGCAAGCTGGGATCAGCCTAGTGGCTGTGTTGTTTTCCAAAATGTTGAATATTCTAGATTGCATGCCCTTGCATACCAATTAGCGGATAAGTTGTCAATCCTGGTAGAAAGCAACGAGAGGGCAATTGAGACCCGAATTGGAGGAGGTGGATTGGATTTACAGTTCCGGCGTAGGGACGGCCAAGACTATGCGGCAGCATCGGCTTCTAGATGGCAAGAGAACCAGTCTTTCAATCTAGGAAAGCAAAGTGGTAGAAATGCATACGGGGGAGTTAGAGCATTGACATATAGCCGAGGGGGAGGAGTTGGATATTCAAGGGATGGCACTACAGGTCAATTACGCAGCAATCAGGGCTCTCGTTATCAGACTGGTTCGTCAGCTAGGGGATCCCAAATGGACGCATCAGCTCGCATGGTTAGTCTCAACAAAGGAGTCCGAGGTTAG 3882 42.81 MSISVASRVESLASSGILSIPKEYVRPQEELNSIGDVFEEERKREGPQVPTIDLNDIDSEDQSVREKCHQELKKAAMDWGVMHLVNHGISDELIARVKEAGRVFFDQPIEEKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHLVYPEEKRDLSIWPKNPTEYTEVTTEYAKQLRILATKILSVLSIGLGLEEGRLEKEVGGIEELLLIWINEAKNLPNMDMFHKTLGDVFSKVSSKIEGRVSSAITSDPYVTVSVSGAVIGRTFVIPNSEDPVWRQHFNVPVAHYGSEVQFVVKDNDVVGSQIIGAVGIPVEQLYSEVKVEGIFPILNSGGKPCKAGAVLSLSIQYIPINKINLYDGRLDSSNDSHVVSATYFPPRKGGKVTLYQDAHVHNDLLPNIKLYGGYKYNHGSCWHDVFNAINQARRLIYITGWSVYHDVGLVRDANNPEDYILGNLLKAKSQEGVRVLLLIWDDPTSKSILGYKTDGLMGTNDEETRRFFKHSSVKVILCPRSAGSGHSWAKQQKLPYLCNHLSLINEDFFYYIFLKFCMEIAIHIQNGTKLLFLYFDSSNYELIPGGPREPWHDLHCQIDGPAAYDVLTNFEERWRKASEAHGLKKLKSSNDDALLKIERISEIIGVEDASRLGIVDPEGWNVQLRKVTHLLHLMIMILQNLVCGKNVLIDMSIHAAYISAIRAAQHFIYIENQYFLGSSYNWNSHKDLGANNLIPMEIALKIVNKIKAKERFSAYIVVPMWPEGNPTSTPIQRILYWQRKTMQMMYEMIYNALKEVGLENTYEPQDYLNFFCLGNREASDGESTVKAGKSGGTKTPQALAQRARRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPRTNQSRPHGQQIYGYRMSLWAEHMGTLEQCFEQPDTVECIRRVRSLSEKNWSQYVGEELVEMRGHLLKYPLDVDRVKLQQMPPGHRYLQTNASDSDDERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNLASNNHEVKQKVISKTFRRFLEVSERQTFTGPPENVRDHVMAATRTLSKGDFQSTFDTISSLDVWKLLRNREVVLEMLKAKIKEEALRTYLFTYSSSYDSLSLTQLTKMFDLTEVQVHSIVSKMMINEELHASWDQPSGCVVFQNVEYSRLHALAYQLADKLSILVESNERAIETRIGGGGLDLQFRRRDGQDYAAASASRWQENQSFNLGKQSGRNAYGGVRALTYSRGGGVGYSRDGTTGQLRSNQGSRYQTGSSARGSQMDASARMVSLNKGVRG 1293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 656717 670335 + Bda023235.1 Bda06g00065 7647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00065 1293 SMART PINT_4 1092 1176 IPR000717 -
Bda06g00065 1293 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 840 867 IPR001736 GO:0003824
Bda06g00065 1293 SUPERFAMILY Phospholipase D/nuclease 372 612 - -
Bda06g00065 1293 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 210 354 IPR035892 -
Bda06g00065 1293 CDD C2_plant_PLD 211 352 - -
Bda06g00065 1293 SUPERFAMILY Winged helix DNA-binding domain 1091 1161 IPR036390 -
Bda06g00065 1293 SMART C2_3c 210 328 IPR000008 -
Bda06g00065 1293 ProSiteProfiles PCI domain profile. 991 1163 IPR000717 -
Bda06g00065 1293 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 211 531 - -
Bda06g00065 1293 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 573 961 - -
Bda06g00065 1293 Pfam Phospholipase D C terminal 911 958 IPR024632 -
Bda06g00065 1293 Pfam PCI domain 1031 1159 IPR000717 -
Bda06g00065 1293 Gene3D - 4 222 IPR027443 -
Bda06g00065 1293 Pfam Phospholipase D Active site motif 841 867 IPR001736 GO:0003824
Bda06g00065 1293 ProSiteProfiles C2 domain profile. 192 329 IPR000008 -
Bda06g00065 1293 MobiDBLite consensus disorder prediction 1248 1280 - -
Bda06g00065 1293 MobiDBLite consensus disorder prediction 1254 1280 - -
Bda06g00065 1293 Gene3D C2 domain 237 335 IPR035892 -
Bda06g00065 1293 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 1092 1176 - -
Bda06g00065 1293 SUPERFAMILY Phospholipase D/nuclease 687 922 - -
Bda06g00065 1293 Pfam C2 domain 211 331 IPR000008 -
Bda06g00065 1293 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 162 IPR026992 -
Bda06g00065 1293 SUPERFAMILY Clavaminate synthase-like 7 208 - -
Bda06g00065 1293 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 975 1022 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bda06g00065 1293 PANTHER PHOSPHOLIPASE D 211 531 IPR015679 -
Bda06g00065 1293 PANTHER PHOSPHOLIPASE D 573 961 IPR015679 -
Bda06g00065 1293 Gene3D Endonuclease Chain A 566 633 - -
Bda06g00065 1293 SMART pld_4 840 867 IPR001736 GO:0003824
Bda06g00065 1293 Gene3D Endonuclease Chain A 674 888 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00065 Bda-Chr6:656717 Bda10g00782 Bda-Chr10:42226594 1.06E-172 dispersed
Bda03g01575 Bda-Chr3:54951530 Bda06g00065 Bda-Chr6:656717 3.42E-07 transposed
Bda08g00221 Bda-Chr8:1963338 Bda06g00065 Bda-Chr6:656717 0 transposed
Bda07g01281 Bda-Chr7:15658298 Bda06g00065 Bda-Chr6:656717 5.98E-22 transposed
Bda06g00065 Bda-Chr6:656717 Bda08g00537 Bda-Chr8:5388294 6.00E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00065 K01115 - qsu:111989288 1037.33