Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00071 | ATGGCGTCGAGTTCTTCTTCGAGAAAACACTCTCTTTACAGAGGCATTCGTTGCAGAAGCGGGAAATGGGTTTCGGAAATCCGAGAGCCACGTAAAACGAATCGAATTTGGCTCGGGACCTTCCCCTCCCCGGAAATGGCTGCTGCCGCACACGACGTTGCTGCCTTAGCGCTCAGAGGAAACGACGCCACACTTAACTTCCCGGCGCTGGTTGGTTCTTATCCTGTTCCGGCTTCTACATCACCGGCCGATATCAGAGCGGCCGCCTTAGCCGCCGCGACGCTGATGAAAATGAGTTCGAAAGATGATGATCGGTCAGAGGAGCAGCTTAGTAAACTGAGCGATGAATTTCTCGACGAGGAGGAGATTTTCGACATGCCCAATTTGCTAGTGGACATGGCGGGAGGAATGCTAATGTCGCCGCCGAGAATGAACTTGCCGCCGGACCACGAGCCAGCTGGGTTTTCCGATGGACAAGAGCGTTTATGGAGTCATTTTTGA | 501 | 53.29 | MASSSSSRKHSLYRGIRCRSGKWVSEIREPRKTNRIWLGTFPSPEMAAAAHDVAALALRGNDATLNFPALVGSYPVPASTSPADIRAAALAAATLMKMSSKDDDRSEEQLSKLSDEFLDEEEIFDMPNLLVDMAGGMLMSPPRMNLPPDHEPAGFSDGQERLWSHF | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 732342 | 732842 | - | Bda023242.1 | Bda06g00071 | 7653 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00071 | 166 | CDD | AP2 | 11 | 70 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00071 | 166 | PANTHER | ETHYLENE RESPONSE FACTOR | 1 | 166 | - | - | |
Bda06g00071 | 166 | PRINTS | Ethylene responsive element binding protein signature | 50 | 70 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00071 | 166 | PRINTS | Ethylene responsive element binding protein signature | 13 | 24 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00071 | 166 | SUPERFAMILY | DNA-binding domain | 11 | 69 | IPR016177 | GO:0003677 | |
Bda06g00071 | 166 | SMART | rav1_2 | 12 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00071 | 166 | Pfam | AP2 domain | 12 | 60 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00071 | 166 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 1 | 166 | - | - | |
Bda06g00071 | 166 | Gene3D | AP2/ERF domain | 12 | 70 | IPR036955 | GO:0003700|GO:0006355 | |
Bda06g00071 | 166 | ProSiteProfiles | AP2/ERF domain profile. | 12 | 68 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00071 | Bda-Chr6:732342 | Bda07g01877 | Bda-Chr7:36182782 | 8.38E-42 | dispersed | |
Bda06g00071 | Bda-Chr6:732342 | Bda08g00532 | Bda-Chr8:5326882 | 1.86E-86 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15970 | PF00847 | AP2 | 4.10E-10 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00071 | - | - | jre:108990846 | 212.231 |