Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00103 ATGGTCTATAGCTATACCAAAAGCTTTAATGCATTTGCGGCAAAGCTTTCACACATTGAAGCCCAAAAGTTATCTGGTAAGAAAAAAATGAAAATAAATTTTTGGTTTCGTTACAGATTAACTCAAACTGTTAAAAGAAAAGTTAAACAGGAAAGCAATATCATCGTGGGCCTATTTGATACAGGAATTACTCCAGAGGCAGATAGCTTCAAGGACGACGGGCTTGATCCTCTACCTGCTAAATGGAAGGGAAGCTGTGGCTCCTTTGCTAATTTCTCAGGCTGCAACAAGAAGATCATTGGAGCCACTTACTTTAAGCTTGACAAGATTCCCGACCATGCCGATATCTTATCTCCAATAGATGTGGACGGCCATGGTACGCACACCTCATCAACCTTAGCAGGCAGCATAGTTCAAGAAGCTAGCCTGTTTGGCCTTGCCAAGGGCTCTGCTCAAGGGGCCGTGCCGTCTGCTCGGGTGGCCATGTACAAGGTCTGTTCGGTGAGCTCTGGGTGTTCAGACATGGACTTGCTTGCTGCATTTGATGCTGCTATACACGATGGTGTGGATATTATATCGGTGTCTATTGGTGGTGGCACATCCAACTACTCAGATGACCCCATAGCAATTGGATCATTTCAAGCACTGAAGAAGGGGATTATCACTTTGGCATCAGCTGGAAATGACGGACCCAGCCTTTCTAGTGTCGTTAATCACGCCCCATGGCTAGTGACTGTGGCCGCCAGTAGCATTGACAGACAGTTCAGAAGCAGAGTTGAGTTGGGCAATGGGCAGAACATCTCTGCAATGGGGAAAAATCTCTTTTTTTTACTTATCCAGGGGATTGGAGTGAGCACATTCCAGCCAAAAGCAGGATTATACCCCTTAGGCAGTGGAGTTGATGTGGTCAAAAACTCTGCAAGCAAGGAAAATGCAAGGTCTTGCACAGACGACTCTTTAGATTCGACTAAGGTGAAGGGAAAGCTTCTGTTCTGTAAATTATCAGCATGGGGTACCGATTCCATTGTGAAAAAATTTGGCGGGACAGGCATTATCGTTCAAAATGGGCAATATCCTGACATTGCAGCACCAGGAATTGACATTTTAGCCGCATACACTCCCTTGAAATCACTCACTGGATTGAAAGGAGATACTCAGTTTTCAAAATTTACCCTCATGTCTGGAACTTCCATGGCTTGTCCTCATGTAGCTGGCGCAGCGGCTTATATCAAGTCCTTTCGTCCAAATTGGTCCCCTTCTGCTATCAAATCAGCCTTGATCACTTCAGCAAAGCCGATGAGCCGGACAGTGAACAGGGAAGCAGAATTTGCATATGGTGCCGGTCAATTAAACCCAACAAGAGCTCTAAATTCAGGCTTAGTCTACGAAATGGAGGACATAAACTACATTCAATACCTCTGCAGCGAAGGCTACCATGGAGAGTTCTTATCTGTCCTCATCGGTTCAAAATCAACCAACTGTTCATCTCTGCTTCCAGGATTCGGATATGACAGTCTAAACTATCCTGCCATGCACTTAAGCTTGAAAACCACAAAAGGGCCAACAATGGCGGTGTTTAGGAGGAGAGTCACAAATGTCGATCCGGCTCTGTCGATTTACAACGTCACCATTAAATCTCCGCAGGGAGTGGATATCAGCGTTCGTCCGGAGGGTATGGCTTTCACTATCGAGCTACAGAAGCGAAGCTTCAAGGGGGTCGTGAGGGCGAACCCCATGGCGTCGCAGACAATGGTTTCTGGTTCGATCTTTTGGAAGAGCTTCCGCCATGTTGTGAGAAGCCCCATTGTGATTTACAGTCCTTGA 1824 46.0 MVYSYTKSFNAFAAKLSHIEAQKLSGKKKMKINFWFRYRLTQTVKRKVKQESNIIVGLFDTGITPEADSFKDDGLDPLPAKWKGSCGSFANFSGCNKKIIGATYFKLDKIPDHADILSPIDVDGHGTHTSSTLAGSIVQEASLFGLAKGSAQGAVPSARVAMYKVCSVSSGCSDMDLLAAFDAAIHDGVDIISVSIGGGTSNYSDDPIAIGSFQALKKGIITLASAGNDGPSLSSVVNHAPWLVTVAASSIDRQFRSRVELGNGQNISAMGKNLFFLLIQGIGVSTFQPKAGLYPLGSGVDVVKNSASKENARSCTDDSLDSTKVKGKLLFCKLSAWGTDSIVKKFGGTGIIVQNGQYPDIAAPGIDILAAYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAGAAAYIKSFRPNWSPSAIKSALITSAKPMSRTVNREAEFAYGAGQLNPTRALNSGLVYEMEDINYIQYLCSEGYHGEFLSVLIGSKSTNCSSLLPGFGYDSLNYPAMHLSLKTTKGPTMAVFRRRVTNVDPALSIYNVTIKSPQGVDISVRPEGMAFTIELQKRSFKGVVRANPMASQTMVSGSIFWKSFRHVVRSPIVIYSP 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1417921 1427619 - Bda023286.1 Bda06g00103 7685

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00103 607 Gene3D - 252 354 - -
Bda06g00103 607 Pfam Fibronectin type-III domain 506 604 IPR041469 -
Bda06g00103 607 Pfam Subtilase family 52 448 IPR000209 GO:0006508|GO:0008236
Bda06g00103 607 Gene3D - 473 606 - -
Bda06g00103 607 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 359 605 - -
Bda06g00103 607 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 359 605 IPR045051 -
Bda06g00103 607 CDD Peptidases_S8_3 52 430 IPR034197 -
Bda06g00103 607 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 34 IPR037045 -
Bda06g00103 607 ProSiteProfiles Serine proteases, subtilase domain profile. 34 456 - -
Bda06g00103 607 SUPERFAMILY Subtilisin-like 49 457 IPR036852 GO:0004252|GO:0006508
Bda06g00103 607 PRINTS Subtilisin serine protease family (S8) signature 51 70 IPR015500 -
Bda06g00103 607 PRINTS Subtilisin serine protease family (S8) signature 121 134 IPR015500 -
Bda06g00103 607 PRINTS Subtilisin serine protease family (S8) signature 394 410 IPR015500 -
Bda06g00103 607 ProSitePatterns Serine proteases, subtilase family, serine active site. 395 405 IPR023828 -
Bda06g00103 607 Gene3D Peptidase S8/S53 domain 53 251 IPR036852 GO:0004252|GO:0006508
Bda06g00103 607 Gene3D Peptidase S8/S53 domain 358 469 IPR036852 GO:0004252|GO:0006508
Bda06g00103 607 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 1 358 - -
Bda06g00103 607 CDD PA_subtilisin_like 259 355 - -
Bda06g00103 607 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 358 IPR045051 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00103 - - - mdm:114821063 667.537
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00103 Bda-Chr6:1417921 Bda07g00505 Bda-Chr7:6451469 6.94E-145 dispersed
Bda06g00103 Bda-Chr6:1417921 Bda15g00241 Bda-Chr15:5060195 5.10E-63 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda12g00712 . 1 767 Subtilisin-like Serine Gene Family AT1G04110 67.4 3.7e-311 1063.9
Bda01g00472 . 5 729 Subtilisin-like Serine Gene Family AT1G20150 52.8 3.8e-207 718.4
Bda01g00472 . 2 475 Subtilisin-like Serine Gene Family AT1G20160 56.6 4.8e-140 495.0
Bda07g00866 . 15 765 Subtilisin-like Serine Gene Family AT1G30600 67.8 6.1e-304 1040.0
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT1G32940 55.3 1.2e-226 783.1
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT1G32950 54.3 9.5e-221 763.5
Bda06g01090 . 25 769 Subtilisin-like Serine Gene Family AT1G32960 55.6 1.6e-237 819.3
Bda06g01090 . 24 769 Subtilisin-like Serine Gene Family AT1G32970 50.5 2.9e-201 698.7
Bda01g01763 . 36 771 Subtilisin-like Serine Gene Family AT2G04160 56.3 3.3e-243 838.2
Bda07g00820 . 3 644 Subtilisin-like Serine Gene Family AT2G04160 59.5 2.3e-225 778.9
Bda02g00365 . 23 761 Subtilisin-like Serine Gene Family AT2G05920 69.9 1.2e-306 1048.9
Bda02g00348 . 23 761 Subtilisin-like Serine Gene Family AT2G05920 69.9 1.6e-306 1048.5
Bda01g01993 . 19 757 Subtilisin-like Serine Gene Family AT2G05920 68.2 1.1e-288 989.2
Bda11g01464 . 26 761 Subtilisin-like Serine Gene Family AT2G05920 56.6 1.6e-231 799.3
Bda08g01361 . 25 760 Subtilisin-like Serine Gene Family AT2G05920 54.5 6.5e-220 760.8
Bda07g01841 . 27 778 Subtilisin-like Serine Gene Family AT2G05920 50.4 1.3e-212 736.5
Bda05g00622 . 27 777 Subtilisin-like Serine Gene Family AT2G05920 51.5 7.2e-203 704.1
Bda01g01594 . 35 764 Subtilisin-like Serine Gene Family AT2G05920 52.4 2.1e-202 702.6
Bda10g00887 . 25 776 Subtilisin-like Serine Gene Family AT2G05920 51.0 8.2e-199 690.6
Bda13g00001 . 6 618 Subtilisin-like Serine Gene Family AT2G05920 51.3 1.3e-175 613.6
Bda10g00876 . 1 522 Subtilisin-like Serine Gene Family AT2G05920 55.9 5.8e-160 561.6
Bda01g01898 . 20 819 Subtilisin-like Serine Gene Family AT2G19170 82.3 0.0e+00 1349.7
Bda11g00106 . 6 819 Subtilisin-like Serine Gene Family AT2G19170 81.5 0.0e+00 1349.0
Bda11g01464 . 7 761 Subtilisin-like Serine Gene Family AT3G14067 53.0 1.4e-222 769.6
Bda02g00348 . 27 761 Subtilisin-like Serine Gene Family AT3G14067 53.6 1.6e-218 756.1
Bda02g00365 . 27 761 Subtilisin-like Serine Gene Family AT3G14067 53.6 2.1e-218 755.7
Bda10g00876 . 1 529 Subtilisin-like Serine Gene Family AT3G14067 69.0 6.0e-213 737.6
Bda01g01993 . 21 755 Subtilisin-like Serine Gene Family AT3G14067 54.0 6.7e-212 734.2
Bda08g01361 . 27 760 Subtilisin-like Serine Gene Family AT3G14067 51.8 6.9e-209 724.2
Bda10g00887 . 1 782 Subtilisin-like Serine Gene Family AT3G14067 51.3 4.5e-200 694.9
Bda05g00622 . 24 783 Subtilisin-like Serine Gene Family AT3G14067 50.7 3.6e-197 685.3
Bda13g00001 . 3 617 Subtilisin-like Serine Gene Family AT3G14067 51.3 1.0e-164 577.4
Bda10g00887 . 24 784 Subtilisin-like Serine Gene Family AT3G14240 76.2 0.0e+00 1180.2
Bda05g00622 . 33 785 Subtilisin-like Serine Gene Family AT3G14240 74.3 0.0e+00 1147.1
Bda11g01464 . 28 757 Subtilisin-like Serine Gene Family AT3G14240 53.2 6.6e-220 760.8
Bda02g00365 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 50.9 2.8e-210 728.8
Bda02g00348 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 50.7 1.4e-209 726.5
Bda01g01993 . 22 751 Subtilisin-like Serine Gene Family AT3G14240 51.7 1.5e-208 723.0
Bda08g01361 . 28 756 Subtilisin-like Serine Gene Family AT3G14240 51.1 2.2e-207 719.2
Bda07g01841 . 31 782 Subtilisin-like Serine Gene Family AT3G14240 50.2 2.9e-207 718.8
Bda01g01594 . 38 760 Subtilisin-like Serine Gene Family AT3G14240 50.5 1.1e-203 706.8
Bda13g00001 . 3 618 Subtilisin-like Serine Gene Family AT3G14240 59.2 1.3e-202 703.4
Bda10g00876 . 1 520 Subtilisin-like Serine Gene Family AT3G14240 51.9 3.7e-146 515.8
Bda06g00103 . 2 444 Subtilisin-like Serine Gene Family AT4G00230 50.7 1.7e-138 490.0
Bda09g00063 . 11 391 Subtilisin-like Serine Gene Family AT4G00230 50.3 1.5e-94 344.0
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT4G10510 54.3 2.7e-223 771.9
Bda06g01090 . 22 769 Subtilisin-like Serine Gene Family AT4G10520 54.9 4.8e-231 797.7
Bda06g01090 . 22 769 Subtilisin-like Serine Gene Family AT4G10530 52.9 3.2e-219 758.4
Bda06g01090 . 24 769 Subtilisin-like Serine Gene Family AT4G10540 54.1 2.8e-234 808.5
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT4G10550 53.3 6.6e-222 767.3
Bda07g00866 . 13 765 Subtilisin-like Serine Gene Family AT4G20430 71.8 0.0e+00 1102.0
Bda01g01751 . 1 285 Subtilisin-like Serine Gene Family AT4G21320 75.9 9.6e-132 466.5
Bda06g01090 . 26 764 Subtilisin-like Serine Gene Family AT4G21630 52.1 1.2e-205 713.4
Bda06g01090 . 26 764 Subtilisin-like Serine Gene Family AT4G21650 52.1 9.5e-211 730.3
Bda01g01898 . 7 819 Subtilisin-like Serine Gene Family AT4G30020 81.2 0.0e+00 1352.4
Bda11g00106 . 6 819 Subtilisin-like Serine Gene Family AT4G30020 80.9 0.0e+00 1345.9
Bda13g00001 . 1 623 Subtilisin-like Serine Gene Family AT4G34980 74.4 1.3e-276 949.1
Bda05g00622 . 28 785 Subtilisin-like Serine Gene Family AT4G34980 54.3 4.2e-227 784.6
Bda10g00887 . 14 784 Subtilisin-like Serine Gene Family AT4G34980 52.8 9.4e-227 783.5
Bda11g01464 . 22 757 Subtilisin-like Serine Gene Family AT4G34980 51.1 3.7e-207 718.4
Bda02g00348 . 25 757 Subtilisin-like Serine Gene Family AT4G34980 50.1 2.1e-202 702.6
Bda02g00365 . 25 757 Subtilisin-like Serine Gene Family AT4G34980 50.1 2.8e-202 702.2
Bda10g00876 . 1 520 Subtilisin-like Serine Gene Family AT4G34980 53.2 6.0e-149 525.0
Bda09g00063 . 28 390 Subtilisin-like Serine Gene Family AT5G03620 53.5 4.5e-104 375.6
Bda09g01152 . 274 1005 Subtilisin-like Serine Gene Family AT5G19660 79.6 0.0e+00 1223.4
Bda07g00866 . 12 541 Subtilisin-like Serine Gene Family AT5G44530 72.3 9.1e-236 813.1
Bda09g00832 . 1 627 Subtilisin-like Serine Gene Family AT5G45640 51.9 1.6e-173 606.7
Bda09g00832 . 1 629 Subtilisin-like Serine Gene Family AT5G45650 57.7 8.9e-204 707.2
Bda07g01841 . 23 782 Subtilisin-like Serine Gene Family AT5G51750 69.9 0.0e+00 1105.1
Bda11g01464 . 26 761 Subtilisin-like Serine Gene Family AT5G51750 52.7 7.6e-224 773.9
Bda08g01361 . 9 760 Subtilisin-like Serine Gene Family AT5G51750 51.3 2.7e-221 765.4
Bda02g00348 . 23 761 Subtilisin-like Serine Gene Family AT5G51750 50.3 2.4e-217 752.3
Bda02g00365 . 23 761 Subtilisin-like Serine Gene Family AT5G51750 50.3 3.1e-217 751.9
Bda13g00001 . 3 623 Subtilisin-like Serine Gene Family AT5G51750 50.9 5.0e-175 611.7
Bda09g00063 . 25 562 Subtilisin-like Serine Gene Family AT5G59190 50.2 6.5e-142 501.5
Bda01g01763 . 23 774 Subtilisin-like Serine Gene Family AT5G59810 63.6 1.8e-281 965.3
Bda07g00820 . 1 647 Subtilisin-like Serine Gene Family AT5G59810 68.0 8.3e-263 903.3
Bda11g01464 . 7 762 Subtilisin-like Serine Gene Family AT5G67360 71.9 0.0e+00 1097.0
Bda08g01361 . 10 761 Subtilisin-like Serine Gene Family AT5G67360 66.7 9.8e-293 1002.7
Bda01g01594 . 17 765 Subtilisin-like Serine Gene Family AT5G67360 61.8 5.4e-267 917.1
Bda02g00365 . 15 762 Subtilisin-like Serine Gene Family AT5G67360 56.2 1.7e-228 789.3
Bda02g00348 . 15 762 Subtilisin-like Serine Gene Family AT5G67360 56.2 2.2e-228 788.9
Bda07g01841 . 25 778 Subtilisin-like Serine Gene Family AT5G67360 54.7 2.9e-228 788.5
Bda01g01993 . 22 755 Subtilisin-like Serine Gene Family AT5G67360 56.8 7.9e-226 780.4
Bda10g00887 . 18 779 Subtilisin-like Serine Gene Family AT5G67360 51.4 4.4e-208 721.5
Bda05g00622 . 25 780 Subtilisin-like Serine Gene Family AT5G67360 50.3 1.1e-203 706.8
Bda14g01267 . 1 527 Subtilisin-like Serine Gene Family AT5G67360 53.4 1.3e-199 693.3
Bda13g00001 . 4 618 Subtilisin-like Serine Gene Family AT5G67360 54.7 7.0e-182 634.4
Bda10g00876 . 1 522 Subtilisin-like Serine Gene Family AT5G67360 53.7 1.2e-149 527.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002819 1 2 1 0 0 2 2 2 2 1 2 2 2 2 2 1 2 1 1 2 2 0 5 2 1 3 4 2 1 1 51
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda06g00103 Bda_Chr06 FPKM 4.264482 3.988513 6.824484 6.646223 6.90541 6.871971 7.934996 7.525865 8.747925