Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00103 ATGGTCTATAGCTATACCAAAAGCTTTAATGCATTTGCGGCAAAGCTTTCACACATTGAAGCCCAAAAGTTATCTGGTAAGAAAAAAATGAAAATAAATTTTTGGTTTCGTTACAGATTAACTCAAACTGTTAAAAGAAAAGTTAAACAGGAAAGCAATATCATCGTGGGCCTATTTGATACAGGAATTACTCCAGAGGCAGATAGCTTCAAGGACGACGGGCTTGATCCTCTACCTGCTAAATGGAAGGGAAGCTGTGGCTCCTTTGCTAATTTCTCAGGCTGCAACAAGAAGATCATTGGAGCCACTTACTTTAAGCTTGACAAGATTCCCGACCATGCCGATATCTTATCTCCAATAGATGTGGACGGCCATGGTACGCACACCTCATCAACCTTAGCAGGCAGCATAGTTCAAGAAGCTAGCCTGTTTGGCCTTGCCAAGGGCTCTGCTCAAGGGGCCGTGCCGTCTGCTCGGGTGGCCATGTACAAGGTCTGTTCGGTGAGCTCTGGGTGTTCAGACATGGACTTGCTTGCTGCATTTGATGCTGCTATACACGATGGTGTGGATATTATATCGGTGTCTATTGGTGGTGGCACATCCAACTACTCAGATGACCCCATAGCAATTGGATCATTTCAAGCACTGAAGAAGGGGATTATCACTTTGGCATCAGCTGGAAATGACGGACCCAGCCTTTCTAGTGTCGTTAATCACGCCCCATGGCTAGTGACTGTGGCCGCCAGTAGCATTGACAGACAGTTCAGAAGCAGAGTTGAGTTGGGCAATGGGCAGAACATCTCTGCAATGGGGAAAAATCTCTTTTTTTTACTTATCCAGGGGATTGGAGTGAGCACATTCCAGCCAAAAGCAGGATTATACCCCTTAGGCAGTGGAGTTGATGTGGTCAAAAACTCTGCAAGCAAGGAAAATGCAAGGTCTTGCACAGACGACTCTTTAGATTCGACTAAGGTGAAGGGAAAGCTTCTGTTCTGTAAATTATCAGCATGGGGTACCGATTCCATTGTGAAAAAATTTGGCGGGACAGGCATTATCGTTCAAAATGGGCAATATCCTGACATTGCAGCACCAGGAATTGACATTTTAGCCGCATACACTCCCTTGAAATCACTCACTGGATTGAAAGGAGATACTCAGTTTTCAAAATTTACCCTCATGTCTGGAACTTCCATGGCTTGTCCTCATGTAGCTGGCGCAGCGGCTTATATCAAGTCCTTTCGTCCAAATTGGTCCCCTTCTGCTATCAAATCAGCCTTGATCACTTCAGCAAAGCCGATGAGCCGGACAGTGAACAGGGAAGCAGAATTTGCATATGGTGCCGGTCAATTAAACCCAACAAGAGCTCTAAATTCAGGCTTAGTCTACGAAATGGAGGACATAAACTACATTCAATACCTCTGCAGCGAAGGCTACCATGGAGAGTTCTTATCTGTCCTCATCGGTTCAAAATCAACCAACTGTTCATCTCTGCTTCCAGGATTCGGATATGACAGTCTAAACTATCCTGCCATGCACTTAAGCTTGAAAACCACAAAAGGGCCAACAATGGCGGTGTTTAGGAGGAGAGTCACAAATGTCGATCCGGCTCTGTCGATTTACAACGTCACCATTAAATCTCCGCAGGGAGTGGATATCAGCGTTCGTCCGGAGGGTATGGCTTTCACTATCGAGCTACAGAAGCGAAGCTTCAAGGGGGTCGTGAGGGCGAACCCCATGGCGTCGCAGACAATGGTTTCTGGTTCGATCTTTTGGAAGAGCTTCCGCCATGTTGTGAGAAGCCCCATTGTGATTTACAGTCCTTGA 1824 46.0 MVYSYTKSFNAFAAKLSHIEAQKLSGKKKMKINFWFRYRLTQTVKRKVKQESNIIVGLFDTGITPEADSFKDDGLDPLPAKWKGSCGSFANFSGCNKKIIGATYFKLDKIPDHADILSPIDVDGHGTHTSSTLAGSIVQEASLFGLAKGSAQGAVPSARVAMYKVCSVSSGCSDMDLLAAFDAAIHDGVDIISVSIGGGTSNYSDDPIAIGSFQALKKGIITLASAGNDGPSLSSVVNHAPWLVTVAASSIDRQFRSRVELGNGQNISAMGKNLFFLLIQGIGVSTFQPKAGLYPLGSGVDVVKNSASKENARSCTDDSLDSTKVKGKLLFCKLSAWGTDSIVKKFGGTGIIVQNGQYPDIAAPGIDILAAYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAGAAAYIKSFRPNWSPSAIKSALITSAKPMSRTVNREAEFAYGAGQLNPTRALNSGLVYEMEDINYIQYLCSEGYHGEFLSVLIGSKSTNCSSLLPGFGYDSLNYPAMHLSLKTTKGPTMAVFRRRVTNVDPALSIYNVTIKSPQGVDISVRPEGMAFTIELQKRSFKGVVRANPMASQTMVSGSIFWKSFRHVVRSPIVIYSP 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1417921 1427619 - Bda023286.1 Bda06g00103 7685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00103 607 Gene3D - 252 354 - -
Bda06g00103 607 Pfam Fibronectin type-III domain 506 604 IPR041469 -
Bda06g00103 607 Pfam Subtilase family 52 448 IPR000209 GO:0006508|GO:0008236
Bda06g00103 607 Gene3D - 473 606 - -
Bda06g00103 607 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 359 605 - -
Bda06g00103 607 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 359 605 IPR045051 -
Bda06g00103 607 CDD Peptidases_S8_3 52 430 IPR034197 -
Bda06g00103 607 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 34 IPR037045 -
Bda06g00103 607 ProSiteProfiles Serine proteases, subtilase domain profile. 34 456 - -
Bda06g00103 607 SUPERFAMILY Subtilisin-like 49 457 IPR036852 GO:0004252|GO:0006508
Bda06g00103 607 PRINTS Subtilisin serine protease family (S8) signature 51 70 IPR015500 -
Bda06g00103 607 PRINTS Subtilisin serine protease family (S8) signature 121 134 IPR015500 -
Bda06g00103 607 PRINTS Subtilisin serine protease family (S8) signature 394 410 IPR015500 -
Bda06g00103 607 ProSitePatterns Serine proteases, subtilase family, serine active site. 395 405 IPR023828 -
Bda06g00103 607 Gene3D Peptidase S8/S53 domain 53 251 IPR036852 GO:0004252|GO:0006508
Bda06g00103 607 Gene3D Peptidase S8/S53 domain 358 469 IPR036852 GO:0004252|GO:0006508
Bda06g00103 607 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 1 358 - -
Bda06g00103 607 CDD PA_subtilisin_like 259 355 - -
Bda06g00103 607 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 358 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00103 Bda-Chr6:1417921 Bda07g00505 Bda-Chr7:6451469 6.94E-145 dispersed
Bda06g00103 Bda-Chr6:1417921 Bda15g00241 Bda-Chr15:5060195 5.10E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00103 - - mdm:114821063 667.537