Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00111 ATGCAGCTTTATCATCATCCATTCTCTTTGGACAGCCAAAAAGTGAGACTTGCTTTAGAAGAAAAAGGGATTGATTACACGTCTTACCATGTCAATCCTATTACAGGTAAGAACTTGGATTCCACATTCTTCAGGATGAACCCAACAGCCAAGATCCCTGTTTTCCAGAATGGAGCTCACATCATGTACATTGAAAGAATTTCTATTGTCACTTCGGGTAGCGTGGACGAAAAGGCGACGAGCAGTAGCCAAGTCATCGTCCAATGGATGCAGAAAATACAAGATTGGAATCCTAAATATTTCACCCTTAACTACATACCCGAAAAGTATCGACTCATGGTCGCAAAATTCTTGAGGCGCATAACGATAGCTCGACTGGCTGAATCGCCCAATCTTGCACCTTCTTACCGCCGCAAACTAAGACAAGCCTATGAGACGGAAGACAAGTTGAAAAATTCAGATGCTGTAAAACAAAACATACAACACCTAAATCAACTTCTGGACGAAGTCGAAGCAAAGTTGTCAGAAAGTGCATATCTAGGCGGAGAAGAGTTTTCTATGGCAGATGTAATGCTCATTCCGGTCCTATCACGGATAGTGATATTGAAGTTGGAAGAGTACATAAAAATCAGGCCAAATATTGCGGAATATTGGTTGGTGGTGCAGGAGAGGCCAAGCTACAAGAAGGTGATCGGAAGGTACTTCAAGGGGTGGAGAAAGCACAAGACTCTAGTCAAAACCTGGTTTTTTGTACATTTCAGAAGCTTGCTGAAGAGGTATTGA 783 42.27 MQLYHHPFSLDSQKVRLALEEKGIDYTSYHVNPITGKNLDSTFFRMNPTAKIPVFQNGAHIMYIERISIVTSGSVDEKATSSSQVIVQWMQKIQDWNPKYFTLNYIPEKYRLMVAKFLRRITIARLAESPNLAPSYRRKLRQAYETEDKLKNSDAVKQNIQHLNQLLDEVEAKLSESAYLGGEEFSMADVMLIPVLSRIVILKLEEYIKIRPNIAEYWLVVQERPSYKKVIGRYFKGWRKHKTLVKTWFFVHFRSLLKRY 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1721087 1722068 + Bda023302.1 Bda06g00111 7693

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00111 260 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 260 IPR044617 GO:0004364
Bda06g00111 260 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 112 244 IPR010987 -
Bda06g00111 260 SUPERFAMILY GST C-terminal domain-like 144 234 IPR036282 -
Bda06g00111 260 CDD GST_N_family 1 63 - -
Bda06g00111 260 Pfam Glutathione S-transferase, C-terminal domain 155 206 - -
Bda06g00111 260 Gene3D - 124 231 - -
Bda06g00111 260 SUPERFAMILY Thioredoxin-like 1 63 IPR036249 -
Bda06g00111 260 Pfam Glutathione S-transferase, N-terminal domain 3 62 IPR004045 -
Bda06g00111 260 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 83 IPR004045 -
Bda06g00111 260 Coils Coil 153 173 - -
Bda06g00111 260 Gene3D Glutaredoxin 1 92 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00111 K22077 GDAP1; ganglioside-induced differentiation-associated protein 1 - pvy:116140169 386.341
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00111 Bda-Chr6:1721087 Bda08g01187 Bda-Chr8:47879835 6.60E-12 dispersed
Bda06g00110 Bda-Chr6:1710126 Bda06g00111 Bda-Chr6:1721087 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda04g00604 . 1 209 Glutathione S-transferase Gene Family AT4G02520 56.6 2.7e-62 235.3
Bda04g00604 . 1 210 Glutathione S-transferase Gene Family AT2G02930 56.3 1.2e-62 236.5
Bda04g00604 . 5 206 Glutathione S-transferase Gene Family AT1G02950 53.7 1.8e-57 219.5
Bda04g00604 . 1 210 Glutathione S-transferase Gene Family AT1G02930 54.8 2.1e-59 225.7
Bda04g00604 . 1 210 Glutathione S-transferase Gene Family AT1G02920 54.3 5.5e-60 227.6
Bda04g00604 . 1 213 Glutathione S-transferase Gene Family AT2G47730 57.5 8.4e-66 247.3
Bda07g01101 . 1 212 Glutathione S-transferase Gene Family AT3G03190 58.0 3.2e-71 265.0
Bda07g01101 . 1 214 Glutathione S-transferase Gene Family AT5G17220 59.3 1.7e-72 269.2
Bda01g00194 . 19 232 Glutathione S-transferase Gene Family AT3G09270 58.6 3.0e-72 268.5
Bda01g00187 . 3 213 Glutathione S-transferase Gene Family AT3G09270 59.0 3.9e-72 268.1
Bda03g00799 . 200 410 Glutathione S-transferase Gene Family AT3G09270 58.0 6.3e-70 260.8
Bda05g00801 . 2 222 Glutathione S-transferase Gene Family AT1G78380 65.2 5.2e-85 310.8
Bda12g00808 BCT 1 211 Glutathione S-transferase Gene Family AT1G78380 67.3 1.1e-84 309.7
Bda12g00804 . 1 209 Glutathione S-transferase Gene Family AT1G78380 66.5 2.0e-84 308.9
Bda12g00805 . 211 417 Glutathione S-transferase Gene Family AT1G78380 66.2 7.4e-84 307.0
Bda12g00806 . 1 231 Glutathione S-transferase Gene Family AT1G78380 59.7 3.8e-80 294.7
Bda12g00805 . 214 420 Glutathione S-transferase Gene Family AT1G78370 64.7 1.0e-80 296.6
Bda05g00801 . 2 220 Glutathione S-transferase Gene Family AT1G78370 62.1 3.2e-79 291.6
Bda12g00808 BCT 1 211 Glutathione S-transferase Gene Family AT1G78370 62.6 2.1e-78 288.9
Bda12g00804 . 6 212 Glutathione S-transferase Gene Family AT1G78370 62.8 2.7e-78 288.5
Bda12g00806 . 1 231 Glutathione S-transferase Gene Family AT1G78370 56.7 4.8e-75 277.7
Bda12g00804 . 1 211 Glutathione S-transferase Gene Family AT1G78340 64.5 5.3e-82 300.8
Bda05g00801 . 2 222 Glutathione S-transferase Gene Family AT1G78340 61.5 1.7e-80 295.8
Bda12g00808 BCT 1 208 Glutathione S-transferase Gene Family AT1G78340 64.4 1.7e-80 295.8
Bda12g00805 . 211 419 Glutathione S-transferase Gene Family AT1G78340 62.7 2.5e-79 292.0
Bda12g00806 . 1 230 Glutathione S-transferase Gene Family AT1G78340 58.3 1.5e-76 282.7
Bda12g00804 . 1 205 Glutathione S-transferase Gene Family AT1G78320 53.2 3.6e-58 221.5
Bda12g00805 . 210 413 Glutathione S-transferase Gene Family AT1G78320 53.4 8.1e-58 220.3
Bda12g00808 BCT 1 212 Glutathione S-transferase Gene Family AT1G78320 50.9 3.1e-57 218.4
Bda05g00801 . 2 220 Glutathione S-transferase Gene Family AT1G78320 50.2 8.9e-57 216.9
Bda05g00801 . 2 225 Glutathione S-transferase Gene Family AT1G17180 63.4 1.4e-85 312.8
Bda12g00804 . 1 209 Glutathione S-transferase Gene Family AT1G17180 63.2 6.4e-83 303.9
Bda12g00808 BCT 1 211 Glutathione S-transferase Gene Family AT1G17180 63.0 1.8e-82 302.4
Bda12g00805 . 1 214 Glutathione S-transferase Gene Family AT1G17180 61.7 3.2e-82 301.6
Bda12g00806 . 1 234 Glutathione S-transferase Gene Family AT1G17180 56.8 4.3e-79 291.2
Bda12g00804 . 2 215 Glutathione S-transferase Gene Family AT1G17190 58.3 1.6e-73 272.7
Bda12g00808 BCT 3 209 Glutathione S-transferase Gene Family AT1G17190 57.5 1.3e-72 269.6
Bda12g00805 . 210 417 Glutathione S-transferase Gene Family AT1G17190 56.3 2.9e-72 268.5
Bda05g00801 . 4 223 Glutathione S-transferase Gene Family AT1G17190 55.0 3.8e-72 268.1
Bda12g00806 . 3 230 Glutathione S-transferase Gene Family AT1G17190 51.3 5.2e-69 257.7
Bda12g00804 . 2 211 Glutathione S-transferase Gene Family AT3G43800 52.3 6.1e-65 244.2
Bda12g00805 . 209 419 Glutathione S-transferase Gene Family AT3G43800 50.7 2.6e-63 238.8
Bda12g00808 BCT 3 211 Glutathione S-transferase Gene Family AT3G43800 53.5 9.8e-63 236.9
Bda05g00801 . 4 220 Glutathione S-transferase Gene Family AT3G43800 50.2 2.7e-60 228.8
Bda05g00801 . 5 225 Glutathione S-transferase Gene Family AT1G53680 55.4 9.7e-71 263.5
Bda12g00805 . 209 419 Glutathione S-transferase Gene Family AT1G53680 58.2 2.8e-70 261.9
Bda12g00804 . 2 211 Glutathione S-transferase Gene Family AT1G53680 56.6 1.5e-68 256.1
Bda12g00808 BCT 4 205 Glutathione S-transferase Gene Family AT1G53680 60.8 2.6e-68 255.4
Bda12g00806 . 4 234 Glutathione S-transferase Gene Family AT1G53680 53.4 8.5e-67 250.4
Bda11g00278 . 16 154 Glutathione S-transferase Gene Family AT2G02380 51.8 1.4e-37 153.3
Bda08g00522 . 1 244 Glutathione S-transferase Gene Family AT5G41210 67.6 7.3e-96 347.1
Bda08g00522 . 1 244 Glutathione S-transferase Gene Family AT5G41240 67.2 4.8e-93 339.0
Bda15g00189 . 247 426 Glutathione S-transferase Gene Family AT5G02780 59.9 2.6e-58 222.2
Bda05g01248 . 2 142 Glutathione S-transferase Gene Family AT5G02780 58.7 4.9e-41 164.9
Bda15g00189 . 247 428 Glutathione S-transferase Gene Family AT3G55040 65.0 1.0e-64 243.8
Bda05g01248 . 1 147 Glutathione S-transferase Gene Family AT3G55040 56.8 7.2e-42 167.9
Bda15g00189 . 247 430 Glutathione S-transferase Gene Family AT5G02790 62.7 3.7e-65 245.0
Bda05g01248 . 1 143 Glutathione S-transferase Gene Family AT5G02790 57.6 2.2e-41 166.0
Bda15g00369 . 1 211 Glutathione S-transferase Gene Family AT1G19570 65.6 3.6e-83 304.7
Bda14g00316 . 1 211 Glutathione S-transferase Gene Family AT1G19570 66.5 2.3e-82 302.0
Bda01g01146 . 6 187 Glutathione S-transferase Gene Family AT1G19570 59.6 1.3e-61 233.0
Bda15g00369 . 1 211 Glutathione S-transferase Gene Family AT1G75270 69.8 1.7e-85 312.4
Bda14g00316 . 1 212 Glutathione S-transferase Gene Family AT1G75270 69.0 6.5e-85 310.5
Bda01g01146 . 6 187 Glutathione S-transferase Gene Family AT1G75270 59.6 1.2e-62 236.5
Bda01g01146 . 2 185 Glutathione S-transferase Gene Family AT5G16710 76.6 1.2e-85 313.2
Bda15g00369 . 3 210 Glutathione S-transferase Gene Family AT5G16710 59.6 1.2e-72 270.0
Bda14g00316 . 3 210 Glutathione S-transferase Gene Family AT5G16710 55.3 6.7e-68 254.2
Bda01g00677 . 1 268 Glutathione S-transferase Gene Family AT1G77290 66.9 3.3e-102 368.2
Bda06g00110 . 1 260 Glutathione S-transferase Gene Family AT1G77290 62.8 1.9e-94 342.4
Bda06g00111 . 1 260 Glutathione S-transferase Gene Family AT1G77290 62.8 1.9e-94 342.4