Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00111 ATGCAGCTTTATCATCATCCATTCTCTTTGGACAGCCAAAAAGTGAGACTTGCTTTAGAAGAAAAAGGGATTGATTACACGTCTTACCATGTCAATCCTATTACAGGTAAGAACTTGGATTCCACATTCTTCAGGATGAACCCAACAGCCAAGATCCCTGTTTTCCAGAATGGAGCTCACATCATGTACATTGAAAGAATTTCTATTGTCACTTCGGGTAGCGTGGACGAAAAGGCGACGAGCAGTAGCCAAGTCATCGTCCAATGGATGCAGAAAATACAAGATTGGAATCCTAAATATTTCACCCTTAACTACATACCCGAAAAGTATCGACTCATGGTCGCAAAATTCTTGAGGCGCATAACGATAGCTCGACTGGCTGAATCGCCCAATCTTGCACCTTCTTACCGCCGCAAACTAAGACAAGCCTATGAGACGGAAGACAAGTTGAAAAATTCAGATGCTGTAAAACAAAACATACAACACCTAAATCAACTTCTGGACGAAGTCGAAGCAAAGTTGTCAGAAAGTGCATATCTAGGCGGAGAAGAGTTTTCTATGGCAGATGTAATGCTCATTCCGGTCCTATCACGGATAGTGATATTGAAGTTGGAAGAGTACATAAAAATCAGGCCAAATATTGCGGAATATTGGTTGGTGGTGCAGGAGAGGCCAAGCTACAAGAAGGTGATCGGAAGGTACTTCAAGGGGTGGAGAAAGCACAAGACTCTAGTCAAAACCTGGTTTTTTGTACATTTCAGAAGCTTGCTGAAGAGGTATTGA 783 42.27 MQLYHHPFSLDSQKVRLALEEKGIDYTSYHVNPITGKNLDSTFFRMNPTAKIPVFQNGAHIMYIERISIVTSGSVDEKATSSSQVIVQWMQKIQDWNPKYFTLNYIPEKYRLMVAKFLRRITIARLAESPNLAPSYRRKLRQAYETEDKLKNSDAVKQNIQHLNQLLDEVEAKLSESAYLGGEEFSMADVMLIPVLSRIVILKLEEYIKIRPNIAEYWLVVQERPSYKKVIGRYFKGWRKHKTLVKTWFFVHFRSLLKRY 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1721087 1722068 + Bda023302.1 Bda06g00111 7693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00111 260 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 260 IPR044617 GO:0004364
Bda06g00111 260 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 112 244 IPR010987 -
Bda06g00111 260 SUPERFAMILY GST C-terminal domain-like 144 234 IPR036282 -
Bda06g00111 260 CDD GST_N_family 1 63 - -
Bda06g00111 260 Pfam Glutathione S-transferase, C-terminal domain 155 206 - -
Bda06g00111 260 Gene3D - 124 231 - -
Bda06g00111 260 SUPERFAMILY Thioredoxin-like 1 63 IPR036249 -
Bda06g00111 260 Pfam Glutathione S-transferase, N-terminal domain 3 62 IPR004045 -
Bda06g00111 260 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 83 IPR004045 -
Bda06g00111 260 Coils Coil 153 173 - -
Bda06g00111 260 Gene3D Glutaredoxin 1 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00111 Bda-Chr6:1721087 Bda08g01187 Bda-Chr8:47879835 6.60E-12 dispersed
Bda06g00110 Bda-Chr6:1710126 Bda06g00111 Bda-Chr6:1721087 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00111 K22077 - pvy:116140169 386.341