Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00122 ATGGAGGGGAAGGAAGAGGATGTTAAGCTCGGAGCGAACAAGTTTTCCGAGAGGCAACCGATTGGTACGTCTGCTCAGACAGACAAGGACTACAAGGAACCACCACCGGCGCCGTTGTTTGAGCCCGGAGAGCTTACCTCGTGGTCGTTTTACAGAGCCGGAATTGCAGAGTTCATTGCAACTTTCTTATTCCTCTACATCTCAGTGTTTACTGTCATGGGTGTTGTCAAAGCTCCTAATAAATGTGCGTCTGTGGGTGTTCAAGGGATTGCTTGGGCTTTTGGTGGTATGATCTTCGCCCTCGTCTACTGCACTGCTGGTATTTCCGGAGGACACATCAACCCGGCTGTGACCTTCGGTCTCTTTCTAGCCAGAAAGCTCTCTCTCACTAGAGCCATCTTCTACATAGTTATGCAATGCCTGGGAGCCATTTGCGGAGCTGGTGTGGTGAAAGGATTTGAAGGCGCAACGACGTACGAACAGAAACTGGGTGGCGCTAACATCGTCAACCCTGGCTACACCAAAGGAGATGGTCTCGGAGCTGAAATCGTCGGCACTTTTGTGCTAGTCTACACCGTCTTCTCCGCCACTGATGCTAAGAGAAACGCCAGGGACTCCCACGTTCCGATTTTGGCGCCACTTCCGATTGGATTTGCGGTGTTTTTGGTTCATTTAGCGACGATTCCGATCACCGGAACTGGTATTAACCCAGCAAGGAGTCTTGGAGCGGCAATCATCTACAACAGACAGCATGCATGGGACGATCAATGGATCTTCTGGTTGGGACCCTTCATCGGAGCTGCTCTTGCTGCGTTGTACCATGTGATTGTGATCAGAGCCATTCCTTTCAAGACCAGATCTTGA 864 50.69 MEGKEEDVKLGANKFSERQPIGTSAQTDKDYKEPPPAPLFEPGELTSWSFYRAGIAEFIATFLFLYISVFTVMGVVKAPNKCASVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFEGATTYEQKLGGANIVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRQHAWDDQWIFWLGPFIGAALAALYHVIVIRAIPFKTRS 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1914445 1915781 + Bda023317.1 Bda06g00122 7704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00122 287 MobiDBLite consensus disorder prediction 1 35 - -
Bda06g00122 287 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Bda06g00122 287 Gene3D Glycerol uptake facilitator protein. 37 285 IPR023271 -
Bda06g00122 287 Pfam Major intrinsic protein 44 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00122 287 PANTHER AQUAPORIN PIP1-3 1 286 - -
Bda06g00122 287 SUPERFAMILY Aquaporin-like 44 279 IPR023271 -
Bda06g00122 287 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00122 287 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00122 287 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00122 287 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00122 287 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00122 287 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00122 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 286 IPR034294 -
Bda06g00122 287 TIGRFAM MIP: MIP family channel proteins 56 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00122 287 CDD MIP 52 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00122 Bda08g00503 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00122 Bda-Chr6:1914445 Bda14g00264 Bda-Chr14:1812855 1.43E-148 dispersed
Bda06g00122 Bda-Chr6:1914445 Bda08g00503 Bda-Chr8:5105350 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00122 K09872 - dcr:108208983 538.495