Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00167 ATGACCGTCTTTGCGGTGAAATGGCGAATGTTGTGGCTTCTCATTGTTTTTCTGTTTTCTGTAGTCATAGGCAAAACCAGTGGTATCAGTCCCGATGGTGAGGCACTTATAAGCTTTAGGACATCAATAGTAAATTCCGATAGTGTTCTACTTCGCTGGAGACCAGAGGATTCTGACCCATGCAATTGGAAAGGAGTTACGTGCGATTCAGACACGAAGAGAGTGACAATATTGAATCTCGAAAATCACAAACTGAGTGGATCAATCTCATCTGACCTTCGAAAGCTCGATAAATTGGAAATTTTAATTCTTTCTGCCAATAACTTCTATGGGATGATTCCAGCCGAACTGGGAAATTGCTCGCAGTTGAAGGGACTATTCTTGGAGCGTAATTACTTGAGTGGATCGATACCGAGTGAATTGGGCAATCTCATAGAACTGGAGAATCTAGACATTTCAAGCAATTCTCTGAGCGGAAATATCCCGGTGTCACTTGGGAAATTGGAGAAGCTAACGACGTTCAATGTGTCGACCAACTTTTTGATCGGACCAATTCCTTCTGTTATCAACTTTGCGGAGAGCTCCTTCGTTGGAAACCGTGGTTTGTGCGGGAGACAGATTGGTGTGACTTGCAAAAACGAGAGTGGAGGATCGGGATCGAATTCCCAATCTCCAAACTCCGCCCAAAATCAAGGTGGAAAAAGGAAATACTCCGGTCGCCTTCTCATAAGTGCATCAGCAACTGTCGGTGCTCTTCTTCTGGTGGCACTTATGTGCTTTTGGGGATGCTTTTTGTATAAGAAGTTTGGTAAAAGCGAAAGTAAAGGTCTAGCTGTCTATGTCTCTGGAGGAGCGTCGATTGTGATGTTTCATGGAGACTTGCCATATTCTTCCAAAGACATAATCAAGAAATTGGAAACTTTGAACGATGAACACATAATCGGCAGTGGGGGCTTCGGAACGGTCTATAAGCTTGCAATGGACGACGGCAATGTATTCGCTTTGAAAAGAATTGTAAAGATGAACGATGGATTTGATCGTTTCTTTGAGAGGGAACTCGAGATTCTCGGAAGTATAAAACACCGCTATCTCGTGAATTTACGGGGCTACTGCAATTCTCCTACGTCAAAACTGCTCATTTATGATTTTCTCTCCGGTGGTAGTCTTGATGAAGCCCTTCACGAAAGATCTGAACTCCTCGACTGGGATGCGCGGTTAAATATCATCTTGGGAGCAGCAAAAGGGTTATCCTACTTGCACCACGATTGCTCGCCGAGGATCATTCATCGGGACATAAAATCAAGCAACATTTTACTTGATGGTAATCTAGAGGCAAGAGTTTCTGACTTTGGACTGGCCAAGCTTTTGGGAGATGAAGAATCTCATATTACAACAATTGTTGCTGGAACATTTGGTTATCTAGCTCCTGAGTATATGCAGAGCGGTTAG 1449 43.48 MTVFAVKWRMLWLLIVFLFSVVIGKTSGISPDGEALISFRTSIVNSDSVLLRWRPEDSDPCNWKGVTCDSDTKRVTILNLENHKLSGSISSDLRKLDKLEILILSANNFYGMIPAELGNCSQLKGLFLERNYLSGSIPSELGNLIELENLDISSNSLSGNIPVSLGKLEKLTTFNVSTNFLIGPIPSVINFAESSFVGNRGLCGRQIGVTCKNESGGSGSNSQSPNSAQNQGGKRKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKSESKGLAVYVSGGASIVMFHGDLPYSSKDIIKKLETLNDEHIIGSGGFGTVYKLAMDDGNVFALKRIVKMNDGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLSGGSLDEALHERSELLDWDARLNIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLGDEESHITTIVAGTFGYLAPEYMQSG 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2377946 2381030 + Bda023370.1 Bda06g00167 7749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00167 482 SUPERFAMILY L domain-like 31 191 - -
Bda06g00167 482 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 482 - -
Bda06g00167 482 SUPERFAMILY Protein kinase-like (PK-like) 292 482 IPR011009 -
Bda06g00167 482 ProSiteProfiles Protein kinase domain profile. 308 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00167 482 Gene3D Phosphorylase Kinase; domain 1 284 383 - -
Bda06g00167 482 Pfam Protein kinase domain 310 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00167 482 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Bda06g00167 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Bda06g00167 482 SMART serkin_6 308 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00167 482 ProSitePatterns Protein kinases ATP-binding region signature. 314 340 IPR017441 GO:0005524
Bda06g00167 482 Gene3D Transferase(Phosphotransferase) domain 1 384 482 - -
Bda06g00167 482 MobiDBLite consensus disorder prediction 214 233 - -
Bda06g00167 482 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 2 36 482 - -
Bda06g00167 482 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00167 Bda-Chr6:2377946 Bda10g00344 Bda-Chr10:34019536 4.47E-08 dispersed
Bda06g00167 Bda-Chr6:2377946 Bda08g00448 Bda-Chr8:4605115 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69656 PF00069 Pkinase 1.20E-35 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00167 - - jre:109001091 770.77