Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00175 | ATGCTACATCATGCTAAGCACTTCCATCTCGGAAGGAATAACCTCTCGGGTTCGATTCCGTTGCATCTTTTTAGCGCAAACATGAAGCTGATACATATTCTTTTGGACGACAATAACCTGATCGGAACCATCCCTTCGACTCTGGGACTCGTTACCTCCCTAGAAGTAGTACGCCTTGATGGAAATATGTTGACTGGAACAGTGCCTTCTACCCTTAACAATCTGACTACCCTCAGTGATCTATTGCTGTCCAACAACCGATTAACCGGACCAATTCCCGATCTAAGCAACCTCAACCTCCTTACCACTCTGGACTTAAGCAATAACACTTTCGACGAATCCGATATACCTCCTTGGTTTTCGACATTAGAGTCATTGACAACATTGATGATGCAAAATACGGGACTCCGAGGCCAACTTCCTTCGGCTTTATTCGGCCTTCCTAACTTGCAGACTGTAGTATTCAGCAACAACAAAGTTAATGGTACCTTAAGTCTTGGCCCCAACTTCAGCAACCAACTGCAACTTATCGATCTGCGTGGCAACCGGATAACTGAGGTTGATGATCGAGGCTACAGATCTTCGTTGATACTTGTTGGTAATCCTGTTTGTCTGGAAGATAGTTCAAAGTATTCTTACTGCTCCATTCCAACCGACAACTCCTCGAGGTATTCGACGCCAACGAGTAACTGCTCGCCGTCTCCATGCAGCTCGAATGAGATTTCGAGCCCCAACTGTATATGTGCACACCCTTTTACGGGCACTCTTGTCTTCAGAGCTCCTTCCTTTTCAAACTTGCAGAATTCGAGCCAATTTTCCGAACTTCATGATTACTTAATGGCATCTTTTCGATCCACCAACCTTCCCGTGAATTCTGTTTCTCTGTCCAATCCAGCCTTTGATGAGGCCAAGTACCTTAATATACACTTAGCAGTCTTTCCGGCAGACTACGATCGTTTCAACCGGACCGGAATTTCAAACGTTGGTTTTGTTCTCAGCAACCAAACCTTCAAGCCTCCAAATTATTATGGACCTTTCTATTTTATGGCAGAACCTTATCAGTACTTTGGAGATGAATCAAGAAAATCATCCTTAAACATTGGTGTCATAATTGGAGTGGCTGTTGGTGTGTCTCTCCTGTTACTGCTTTTAGTCGTGGCTGCGGCTTGTGCCATTCGCCAAAAGAAAAGAGCAACCAGAGCTGCCGGACAGAAGAATCCTTTTGCGGAGTGGGATTCGACGAAGAGAAGCGGCGATGTACCGCAATTAAAGGGTGCAAGATGGTTCTCTTTCGAGGAGCTGAAGAAGAGCACCGATAATTTTTCAGAAACAAATGAAATCGGATCCGGGGGCTATGGGAAGGTTTACCGGGGAATTCTACCGAAAGGGGAGCTGATCGCCATCAAAAGAGCTAAAAAGGGATCTATGCAGGGGGGGATTGAGTTCAAAACTGAAATTGAGCTTCTGTCCAGGGTTCATCACAGAAATCTTGTCACTCTCTTGGGTTTTTGTTTTGAGCAAGGTGAACAGATGCTGGTCTATGAGTATGTTCCAAATGGTAATTTGAGGGATGCTCTATCAGGGAAGACAGGAATAAGGTTGGAATGGATGAGGAGGCTCAAAATAGCTTTGGGTGCGGCCAGAGGCGTGTCGTATCTACACGAACTTGCGAACCCACCGATCATACACAGGGACATTAAATCAAACAACATTTTATTGGACGAAAAACTTAATGCAAAAGTAGCTGATTTTGGTCTCTCCAAGCTCATGCCCGACTGCGACGTCAACCATGTCACGACACAAGTTAAAGGAACAATGGGATACTTGGATCCGGAATACTACATGACACAACAACTGACCGAGAAGAGCGATGTGTATGGTTTTGGGGTGCTTATGTTAGAGTTAATAACTGCAAGAAAGCCGATAGAACGAGGAAAGCACATCGTGAGGGAGGTTCAAAATGCGATGGATAAAACGAAACCTCTTTATAACCTCGAAGAAATTCTCGATCTGACCATCACTTCATCAGCATTGCAAGGTTTGGAGAAGTTTGTGGATCTAGCCTTGAGATGTGTTGAAGAAACAGGAGCTAGCAGGCCAACAATGGGAGAAGTGGTGAAAGAGATAGAGAATATTATGGTGATTGCTGGTTTGAATCCAAACGCAGAATCTGCTTCAACTTCTGCAAGTTATGAGGAAGCAGGTACCGGGACGGGTCATCATCCTTACAGCAACCGTGAATTCGGCTTTACTGGTGGATCTCCGCGCATCTAA | 2274 | 44.94 | MLHHAKHFHLGRNNLSGSIPLHLFSANMKLIHILLDDNNLIGTIPSTLGLVTSLEVVRLDGNMLTGTVPSTLNNLTTLSDLLLSNNRLTGPIPDLSNLNLLTTLDLSNNTFDESDIPPWFSTLESLTTLMMQNTGLRGQLPSALFGLPNLQTVVFSNNKVNGTLSLGPNFSNQLQLIDLRGNRITEVDDRGYRSSLILVGNPVCLEDSSKYSYCSIPTDNSSRYSTPTSNCSPSPCSSNEISSPNCICAHPFTGTLVFRAPSFSNLQNSSQFSELHDYLMASFRSTNLPVNSVSLSNPAFDEAKYLNIHLAVFPADYDRFNRTGISNVGFVLSNQTFKPPNYYGPFYFMAEPYQYFGDESRKSSLNIGVIIGVAVGVSLLLLLLVVAAACAIRQKKRATRAAGQKNPFAEWDSTKRSGDVPQLKGARWFSFEELKKSTDNFSETNEIGSGGYGKVYRGILPKGELIAIKRAKKGSMQGGIEFKTEIELLSRVHHRNLVTLLGFCFEQGEQMLVYEYVPNGNLRDALSGKTGIRLEWMRRLKIALGAARGVSYLHELANPPIIHRDIKSNNILLDEKLNAKVADFGLSKLMPDCDVNHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYGFGVLMLELITARKPIERGKHIVREVQNAMDKTKPLYNLEEILDLTITSSALQGLEKFVDLALRCVEETGASRPTMGEVVKEIENIMVIAGLNPNAESASTSASYEEAGTGTGHHPYSNREFGFTGGSPRI | 757 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2450799 | 2454806 | + | Bda023379.2 | Bda06g00175 | 7757 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00175 | 757 | SUPERFAMILY | Protein kinase-like (PK-like) | 427 | 721 | IPR011009 | - | |
Bda06g00175 | 757 | Gene3D | Phosphorylase Kinase; domain 1 | 412 | 516 | - | - | |
Bda06g00175 | 757 | Pfam | Protein tyrosine and serine/threonine kinase | 444 | 708 | IPR001245 | GO:0004672|GO:0006468 | |
Bda06g00175 | 757 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 561 | 573 | IPR008271 | GO:0004672|GO:0006468 | |
Bda06g00175 | 757 | Gene3D | Ribonuclease Inhibitor | 93 | 246 | IPR032675 | - | |
Bda06g00175 | 757 | CDD | STKc_IRAK | 447 | 712 | - | - | |
Bda06g00175 | 757 | SMART | serkin_6 | 441 | 714 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda06g00175 | 757 | ProSiteProfiles | Protein kinase domain profile. | 441 | 714 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda06g00175 | 757 | Gene3D | Ribonuclease Inhibitor | 1 | 92 | IPR032675 | - | |
Bda06g00175 | 757 | SUPERFAMILY | L domain-like | 5 | 190 | - | - | |
Bda06g00175 | 757 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 3 | 733 | - | - | |
Bda06g00175 | 757 | ProSiteProfiles | Leucine-rich repeat profile. | 77 | 99 | IPR001611 | GO:0005515 | |
Bda06g00175 | 757 | PANTHER | - | 3 | 733 | - | - | |
Bda06g00175 | 757 | Gene3D | Transferase(Phosphotransferase) domain 1 | 517 | 725 | - | - | |
Bda06g00175 | 757 | ProSitePatterns | Protein kinases ATP-binding region signature. | 447 | 473 | IPR017441 | GO:0005524 | |
Bda06g00175 | 757 | MobiDBLite | consensus disorder prediction | 726 | 757 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda06g00175 | Bda08g00430 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01357 | Bda-Chr3:49237166 | Bda06g00175 | Bda-Chr6:2450799 | 2.58E-06 | dispersed | |
Bda06g00175 | Bda-Chr6:2450799 | Bda14g01586 | Bda-Chr14:34138287 | 9.74E-127 | dispersed | |
Bda14g00252 | Bda-Chr14:1767877 | Bda06g00175 | Bda-Chr6:2450799 | 3.49E-66 | transposed | |
Bda06g00175 | Bda-Chr6:2450799 | Bda08g00430 | Bda-Chr8:4352745 | 1.75E-07 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69657 | PF07714 | PK_Tyr_Ser-Thr | 4.00E-47 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00175 | - | - | pop:18098395 | 903.664 |