Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00175 ATGCTACATCATGCTAAGCACTTCCATCTCGGAAGGAATAACCTCTCGGGTTCGATTCCGTTGCATCTTTTTAGCGCAAACATGAAGCTGATACATATTCTTTTGGACGACAATAACCTGATCGGAACCATCCCTTCGACTCTGGGACTCGTTACCTCCCTAGAAGTAGTACGCCTTGATGGAAATATGTTGACTGGAACAGTGCCTTCTACCCTTAACAATCTGACTACCCTCAGTGATCTATTGCTGTCCAACAACCGATTAACCGGACCAATTCCCGATCTAAGCAACCTCAACCTCCTTACCACTCTGGACTTAAGCAATAACACTTTCGACGAATCCGATATACCTCCTTGGTTTTCGACATTAGAGTCATTGACAACATTGATGATGCAAAATACGGGACTCCGAGGCCAACTTCCTTCGGCTTTATTCGGCCTTCCTAACTTGCAGACTGTAGTATTCAGCAACAACAAAGTTAATGGTACCTTAAGTCTTGGCCCCAACTTCAGCAACCAACTGCAACTTATCGATCTGCGTGGCAACCGGATAACTGAGGTTGATGATCGAGGCTACAGATCTTCGTTGATACTTGTTGGTAATCCTGTTTGTCTGGAAGATAGTTCAAAGTATTCTTACTGCTCCATTCCAACCGACAACTCCTCGAGGTATTCGACGCCAACGAGTAACTGCTCGCCGTCTCCATGCAGCTCGAATGAGATTTCGAGCCCCAACTGTATATGTGCACACCCTTTTACGGGCACTCTTGTCTTCAGAGCTCCTTCCTTTTCAAACTTGCAGAATTCGAGCCAATTTTCCGAACTTCATGATTACTTAATGGCATCTTTTCGATCCACCAACCTTCCCGTGAATTCTGTTTCTCTGTCCAATCCAGCCTTTGATGAGGCCAAGTACCTTAATATACACTTAGCAGTCTTTCCGGCAGACTACGATCGTTTCAACCGGACCGGAATTTCAAACGTTGGTTTTGTTCTCAGCAACCAAACCTTCAAGCCTCCAAATTATTATGGACCTTTCTATTTTATGGCAGAACCTTATCAGTACTTTGGAGATGAATCAAGAAAATCATCCTTAAACATTGGTGTCATAATTGGAGTGGCTGTTGGTGTGTCTCTCCTGTTACTGCTTTTAGTCGTGGCTGCGGCTTGTGCCATTCGCCAAAAGAAAAGAGCAACCAGAGCTGCCGGACAGAAGAATCCTTTTGCGGAGTGGGATTCGACGAAGAGAAGCGGCGATGTACCGCAATTAAAGGGTGCAAGATGGTTCTCTTTCGAGGAGCTGAAGAAGAGCACCGATAATTTTTCAGAAACAAATGAAATCGGATCCGGGGGCTATGGGAAGGTTTACCGGGGAATTCTACCGAAAGGGGAGCTGATCGCCATCAAAAGAGCTAAAAAGGGATCTATGCAGGGGGGGATTGAGTTCAAAACTGAAATTGAGCTTCTGTCCAGGGTTCATCACAGAAATCTTGTCACTCTCTTGGGTTTTTGTTTTGAGCAAGGTGAACAGATGCTGGTCTATGAGTATGTTCCAAATGGTAATTTGAGGGATGCTCTATCAGGGAAGACAGGAATAAGGTTGGAATGGATGAGGAGGCTCAAAATAGCTTTGGGTGCGGCCAGAGGCGTGTCGTATCTACACGAACTTGCGAACCCACCGATCATACACAGGGACATTAAATCAAACAACATTTTATTGGACGAAAAACTTAATGCAAAAGTAGCTGATTTTGGTCTCTCCAAGCTCATGCCCGACTGCGACGTCAACCATGTCACGACACAAGTTAAAGGAACAATGGGATACTTGGATCCGGAATACTACATGACACAACAACTGACCGAGAAGAGCGATGTGTATGGTTTTGGGGTGCTTATGTTAGAGTTAATAACTGCAAGAAAGCCGATAGAACGAGGAAAGCACATCGTGAGGGAGGTTCAAAATGCGATGGATAAAACGAAACCTCTTTATAACCTCGAAGAAATTCTCGATCTGACCATCACTTCATCAGCATTGCAAGGTTTGGAGAAGTTTGTGGATCTAGCCTTGAGATGTGTTGAAGAAACAGGAGCTAGCAGGCCAACAATGGGAGAAGTGGTGAAAGAGATAGAGAATATTATGGTGATTGCTGGTTTGAATCCAAACGCAGAATCTGCTTCAACTTCTGCAAGTTATGAGGAAGCAGGTACCGGGACGGGTCATCATCCTTACAGCAACCGTGAATTCGGCTTTACTGGTGGATCTCCGCGCATCTAA 2274 44.94 MLHHAKHFHLGRNNLSGSIPLHLFSANMKLIHILLDDNNLIGTIPSTLGLVTSLEVVRLDGNMLTGTVPSTLNNLTTLSDLLLSNNRLTGPIPDLSNLNLLTTLDLSNNTFDESDIPPWFSTLESLTTLMMQNTGLRGQLPSALFGLPNLQTVVFSNNKVNGTLSLGPNFSNQLQLIDLRGNRITEVDDRGYRSSLILVGNPVCLEDSSKYSYCSIPTDNSSRYSTPTSNCSPSPCSSNEISSPNCICAHPFTGTLVFRAPSFSNLQNSSQFSELHDYLMASFRSTNLPVNSVSLSNPAFDEAKYLNIHLAVFPADYDRFNRTGISNVGFVLSNQTFKPPNYYGPFYFMAEPYQYFGDESRKSSLNIGVIIGVAVGVSLLLLLLVVAAACAIRQKKRATRAAGQKNPFAEWDSTKRSGDVPQLKGARWFSFEELKKSTDNFSETNEIGSGGYGKVYRGILPKGELIAIKRAKKGSMQGGIEFKTEIELLSRVHHRNLVTLLGFCFEQGEQMLVYEYVPNGNLRDALSGKTGIRLEWMRRLKIALGAARGVSYLHELANPPIIHRDIKSNNILLDEKLNAKVADFGLSKLMPDCDVNHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYGFGVLMLELITARKPIERGKHIVREVQNAMDKTKPLYNLEEILDLTITSSALQGLEKFVDLALRCVEETGASRPTMGEVVKEIENIMVIAGLNPNAESASTSASYEEAGTGTGHHPYSNREFGFTGGSPRI 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2450799 2454806 + Bda023379.2 Bda06g00175 7757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00175 757 SUPERFAMILY Protein kinase-like (PK-like) 427 721 IPR011009 -
Bda06g00175 757 Gene3D Phosphorylase Kinase; domain 1 412 516 - -
Bda06g00175 757 Pfam Protein tyrosine and serine/threonine kinase 444 708 IPR001245 GO:0004672|GO:0006468
Bda06g00175 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Bda06g00175 757 Gene3D Ribonuclease Inhibitor 93 246 IPR032675 -
Bda06g00175 757 CDD STKc_IRAK 447 712 - -
Bda06g00175 757 SMART serkin_6 441 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00175 757 ProSiteProfiles Protein kinase domain profile. 441 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00175 757 Gene3D Ribonuclease Inhibitor 1 92 IPR032675 -
Bda06g00175 757 SUPERFAMILY L domain-like 5 190 - -
Bda06g00175 757 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 733 - -
Bda06g00175 757 ProSiteProfiles Leucine-rich repeat profile. 77 99 IPR001611 GO:0005515
Bda06g00175 757 PANTHER - 3 733 - -
Bda06g00175 757 Gene3D Transferase(Phosphotransferase) domain 1 517 725 - -
Bda06g00175 757 ProSitePatterns Protein kinases ATP-binding region signature. 447 473 IPR017441 GO:0005524
Bda06g00175 757 MobiDBLite consensus disorder prediction 726 757 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00175 Bda08g00430 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01357 Bda-Chr3:49237166 Bda06g00175 Bda-Chr6:2450799 2.58E-06 dispersed
Bda06g00175 Bda-Chr6:2450799 Bda14g01586 Bda-Chr14:34138287 9.74E-127 dispersed
Bda14g00252 Bda-Chr14:1767877 Bda06g00175 Bda-Chr6:2450799 3.49E-66 transposed
Bda06g00175 Bda-Chr6:2450799 Bda08g00430 Bda-Chr8:4352745 1.75E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69657 PF07714 PK_Tyr_Ser-Thr 4.00E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00175 - - pop:18098395 903.664