Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00177 ATGGCGATCAACTACGAGAAAGAGGAGGCAGTTTGCGTCACCGGTGCCAACGGCTTCATCGGGTCATGGATTGTTAGAACGCTTTTGGAAGACGGCTACGCCAACATTCACGCCTCCATCTTCCCTGGTTCAGACGCTTCGCATCTTTTCACTCTCAGAGATTCTGTCAACTCTGCCGCTAAACTGACTGTGTTTCAGGCCGATTTAATGGACGCCGGCGCGTTTGTTAGAGCGGTGGACGGCTGCGTAGGGGTCTTTCACGTCGCCTCACCCTGCACGCTCGAGGAGCCTAAGAATCCTCATACTGAGCTTGTGATTCCTGCGGTTCAAGGAACCCTAAATGTGCTCGACGCAGCCAGGCGAGCCGGGGTTCGGCGCGTGGTTTTAACCTCCTCTATCTCGGCTCTGGTTCCCAATCCCTCATGGCCATCTCATATACCTTTCGATGAGACTTCCTGGACCGACCTCCATTATTGCGAATCTCGTCAGAAATGGTATCCAGTGTCAAAGACCCTGGCAGAAAAGGCAGCGTGGGAATATGCAGAGAAGCATAAACTGGATGTCGTCTCGATCCTTCCATCAACCTGTCTTGGCCCGCTCTTGCAGCCTGGATTGAATGCGAGTTGTGCCGTGTTGAAGAACTTGCTGCAGGGCTCGAATGACAGTCAAGAATATCACTGGTTGGGGGCTGTTCATGTCAAAGATGTAGCCAAAGCCCAGGTTTTGTTGTTCCAAACTCCTCCTGCTTCCGGTAGATATCTTTGCACGAACGGCATTTATCAGTTCTCCCATTTTGCTGACAGAGTCTCCAAGCTCTTTCCTGAGTTTTCTGTTCACAGTTTTAAAGGCGATACCCAACCGGGACTAATGCCATGCGAAGAGGCTGCCAAAAGATTAATTAATCTCGGATTTTCTTTTACTCCTATTGAAGATGCTGTTCGAGAGACTGTGGAGAGTCTCAGAAACAGAAGGTTCCTATAA 981 50.25 MAINYEKEEAVCVTGANGFIGSWIVRTLLEDGYANIHASIFPGSDASHLFTLRDSVNSAAKLTVFQADLMDAGAFVRAVDGCVGVFHVASPCTLEEPKNPHTELVIPAVQGTLNVLDAARRAGVRRVVLTSSISALVPNPSWPSHIPFDETSWTDLHYCESRQKWYPVSKTLAEKAAWEYAEKHKLDVVSILPSTCLGPLLQPGLNASCAVLKNLLQGSNDSQEYHWLGAVHVKDVAKAQVLLFQTPPASGRYLCTNGIYQFSHFADRVSKLFPEFSVHSFKGDTQPGLMPCEEAAKRLINLGFSFTPIEDAVRETVESLRNRRFL 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2457941 2459859 - Bda023381.1 Bda06g00177 7759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00177 326 CDD FR_SDR_e 11 304 - -
Bda06g00177 326 Pfam NAD dependent epimerase/dehydratase family 11 247 IPR001509 -
Bda06g00177 326 Gene3D - 2 326 - -
Bda06g00177 326 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 316 - -
Bda06g00177 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 316 - -
Bda06g00177 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 321 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00177 Bda-Chr6:2457941 Bda09g00123 Bda-Chr9:2070067 1.94E-93 dispersed
Bda06g00177 Bda-Chr6:2457941 Bda09g00117 Bda-Chr9:2018990 1.87E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00177 - - vvi:100245372 497.278