Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00184 | ATGGAACTCTCCAATCAAGAAGCTGATATTCCACTTCCAATAAACAGTAGCTATGGCGGGGGACATCAACATGGGCACGGGCATGGGCACGGGCACATGATCCATCACCATGATCACTCCATCAACATTCACTCATCTTCTCCACAAATACCCACCAATAACAATGGACAGTCAAACATACCCACTATCCTAGAGGATCATCAAACCTTAGCAGTAGCAAACTACAAGAGACCATCGTCAACGGTCAAATACAAAGAGTGCTTGAAAAATCATGCAGCTTCAATTGGAGGAAATGCAACAGATGGGTGTGGAGAATTCATGCCTAGTGGAGAAGAAGGCTCCATTGAAGCCCTCACTTGCTCAGCCTGTAATTGCCATAGAAACTTCCATAGAAAAGAAGTTGAAGGAGAGAATGAGTTTCCTCTCCATAGCCAACACCTCAACACCAATAGGGTTGGAAGAAAATTCATCTTCAACCATCATAAGAACATTATAGCTCCAGAAGCTTTAGCCTATTCTACGGCTACAGGCACGTTTATACCCACCAGAACCTTACCAGTTCCCCCTCATCAGATGATAATGTCCTACCAGATGCCATCTCTTCCTTCGGAATCGGACGAGCAAGAAGGCGGCAATGGCGGCGGGGGAGGAGCGGCTAGGGCTCCGCAGGTGGCGAAGAAGAGATTCAGGACAAAATTCAGTCAAGAACAGAAGGAGAAAATGCTAAACTTTGCAGAAAAAATAGGGTGGAAAATGCAGAAGCAAGAAGAGGGTGTGGTGCAGCAGTTCTGCCAAGAGATTGGAGTGAAGAGGAGAGTCCTCAAAGTTTGGATGCACAACAATAAGCATAATCTAGCCACTAAGAATCCATCCTCTTCTGGTTGA | 885 | 45.76 | MELSNQEADIPLPINSSYGGGHQHGHGHGHGHMIHHHDHSINIHSSSPQIPTNNNGQSNIPTILEDHQTLAVANYKRPSSTVKYKECLKNHAASIGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRKEVEGENEFPLHSQHLNTNRVGRKFIFNHHKNIIAPEALAYSTATGTFIPTRTLPVPPHQMIMSYQMPSLPSESDEQEGGNGGGGGAARAPQVAKKRFRTKFSQEQKEKMLNFAEKIGWKMQKQEEGVVQQFCQEIGVKRRVLKVWMHNNKHNLATKNPSSSG | 294 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2514767 | 2515651 | + | Bda023387.1 | Bda06g00184 | 7766 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00184 | 294 | Pfam | ZF-HD protein dimerisation region | 82 | 134 | IPR006456 | - | |
Bda06g00184 | 294 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 226 | 282 | IPR006455 | - | |
Bda06g00184 | 294 | SUPERFAMILY | Homeodomain-like | 214 | 285 | IPR009057 | - | |
Bda06g00184 | 294 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 84 | 133 | IPR006456 | - | |
Bda06g00184 | 294 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 83 | 134 | IPR006456 | - | |
Bda06g00184 | 294 | MobiDBLite | consensus disorder prediction | 200 | 228 | - | - | |
Bda06g00184 | 294 | Gene3D | - | 212 | 288 | - | - | |
Bda06g00184 | 294 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 29 | 288 | - | - | |
Bda06g00184 | 294 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 4 | 29 | 288 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01373 | Bda-Chr1:49612000 | Bda06g00184 | Bda-Chr6:2514767 | 1.10E-47 | dispersed | |
Bda06g00184 | Bda-Chr6:2514767 | Bda11g01865 | Bda-Chr11:53736302 | 2.45E-56 | dispersed | |
Bda13g01690 | Bda-Chr13:40265752 | Bda06g00184 | Bda-Chr6:2514767 | 2.44E-51 | dispersed | |
Bda15g00602 | Bda-Chr15:9239608 | Bda06g00184 | Bda-Chr6:2514767 | 8.72E-21 | dispersed | |
Bda06g00184 | Bda-Chr6:2514767 | Bda01g01497 | Bda-Chr1:50842309 | 4.90E-58 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15982 | PF04770 | ZF-HD_dimer | 8.50E-30 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00184 | - | - | qsu:112015870 | 363.999 |