Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00188 ATGAATGAACCTCTGTTGCTTCGTAGAAGAAGCAGCATCAGCAAAACCTCTCAGCTCGCCATTGTTGGCGCCAATGTCTGCCCCATTGAAAGCCTCGACTACGAGATCGCAGAGAATGATCTTTTCATGCAGGACTGGAGATCCAGAACAAAGAAAGAGATATTTCAATATCTTGTCCTCAAATGGACGCTTGCCCTGCTTATTGGTGTCAGCACAGGGCTTGTTGGCTTCTTCAATAACCTTGCTGTCGAAAATATAGCTGGGTTCAAACTACTGCTTGCTAACAACTTCATGCTTCAGAACAAGTTTTATCAGGCATTTGCAGCACTTGCTAGTTGCAACATGGTTTTGGCTATTGCTGCATCTACATTATGTGCCTACATTGCACCTGCAGCTGCAGGCTCTGGCATTCCAGAAGTGAAAGCGTACCTCAATGGGATAGATGCTCATTCCATGTTGGCCCCGACTACCCTCTTTGTAAAGATCTTTGGTTCCATTTTAGGTGTTGCTGCTGGATTCGTTGTGGGTAAGGAAGGACCTATGGTACATACTGGTGCATGCATAGCTTCTTTACTTGGACAAGGTGGCTCTAGAAAATACCACTTAACTTGGAAGTGGCTCAGATACTTCAAAAATGATAGGGATAGGCGGGATTTGATCACCTGTGGTGCTGCTGCTGGAGTAGCAGCTGCCTTCCGTGCCCCAGTTGGTGGAGTTCTCTTTGCCCTTGAAGAAGCTGCTTCATGGTGGAGGAATGCTCTTCTTTGGAGAACCTTCTTTACAACTGCCGTAGTAGCAGTTGTGTTGAAAGGTTTCATAGGGTTTTGTCGGGGAGGAAAATGTGGACTTTTTGGCGAGGGAGGCCTAATTATGTATGATGTTAATTCAGAAAAAGTTTTGTACCACACCCCAGATTTACTGGCTGTGATATTACTAGGAGTTCTTGGTGGTGTCTTTGGAAGCCTTTACAATTATTTTGTCGGCAAGGTTCTCCGCACTTACAGCATCGTCAATGAGAGAGGTCCTTCCCTTAAAATCCTACTTGTTGTTGCCATTTCTCTATTGACTTCTTGTTGCTCTTACGGTCTTCCATGGCTCTCTATCTGCATACCTTGCCCTGCTCACTTGGAGGATCAGTGTCCCACCATAGGTCGCACTGGTAATTACAAGAGCTTTCAGTGCCCTCCTAACCATTACAATGATCTTGCTTCGCTTTTCCTGAATACCAATGATGACGCAATTCGCAACCTGCTGAGCTCTGCTTCTGATAAGGAATTTCACCTCTCAACCCTTGCAATTTTCTTTGCTGCCATCTACTTTCTTGGCATTATCACTTATGGAATTGCTATTCCATCTGGCCTCTTCATTCCCATCATACTTGCTGGGTCATCTTATGGGCGCCTTGTTGGGACACTTGTTGGCTCTCTATCCAATCTTGATGTGGGTCTCTTTGCTCTCCTCGGAGCTGCATCTTTTCTTGGCGGCACCATGAGAATGACTGTTTCTCTATGCGTCATCCTTCTAGAACTTACTAATGATCTTTTGATGCTTCCATTGGTGATGCTTGTTCTTCTAATTTCAAAAACTGTAGCTGATTGTTTTAACAAAGGGGTCTATGACCAAATTGTAAAAATGAAGGGGTTGCCATACATGGAATCCCATGCAGAGCCATATATGAGCCACTTGGTTGTTAGTGATGTCGTGTCTGGTCCGCTGATTACATTTTCTGGAGTAGAAAAGGTTGGAACCTTAATGCATGCTTTGAAGATGACAAAACATAATGGATTCCCTGTTATCGATGAGCCCCCAATATCGGATGCTCCGGAATTGTGTGGGCTTGTTCTGAGGTCTCATCTTCTTGTGTTGCTCAAAGGGAAGAATTTCACTAAGCATAAAGGGACTACTGGGTCAGCAATAATGAGGAGATTTACTGCATATGATTTTGCAAAAGCAGGATCAGGTAAAGGGGTGAAGATGGGGGACTTGGATATCAAAGTGGATGAGATGGAGAAGTATCTAGATCTCCATCCTATTACAAATACATCCCCTTATACCGTAGTGGAAACAGTGTCTCTTGCTAAAGCAGCTATTCTCTTTCGCGACCTTGGCTTACGTCACTTATTGGTGGTGCCTAAGAAACAAGGGCGGCCTCCAATTGTCGGAATCCTTACACGACATGACTTTATGCGGGAGCACGTGCTAGGACTTTACCCACATTTCAATACTGATAAGTAG 2235 44.52 MNEPLLLRRRSSISKTSQLAIVGANVCPIESLDYEIAENDLFMQDWRSRTKKEIFQYLVLKWTLALLIGVSTGLVGFFNNLAVENIAGFKLLLANNFMLQNKFYQAFAALASCNMVLAIAASTLCAYIAPAAAGSGIPEVKAYLNGIDAHSMLAPTTLFVKIFGSILGVAAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRNALLWRTFFTTAVVAVVLKGFIGFCRGGKCGLFGEGGLIMYDVNSEKVLYHTPDLLAVILLGVLGGVFGSLYNYFVGKVLRTYSIVNERGPSLKILLVVAISLLTSCCSYGLPWLSICIPCPAHLEDQCPTIGRTGNYKSFQCPPNHYNDLASLFLNTNDDAIRNLLSSASDKEFHLSTLAIFFAAIYFLGIITYGIAIPSGLFIPIILAGSSYGRLVGTLVGSLSNLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNDLLMLPLVMLVLLISKTVADCFNKGVYDQIVKMKGLPYMESHAEPYMSHLVVSDVVSGPLITFSGVEKVGTLMHALKMTKHNGFPVIDEPPISDAPELCGLVLRSHLLVLLKGKNFTKHKGTTGSAIMRRFTAYDFAKAGSGKGVKMGDLDIKVDEMEKYLDLHPITNTSPYTVVETVSLAKAAILFRDLGLRHLLVVPKKQGRPPIVGILTRHDFMREHVLGLYPHFNTDK 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2554598 2559158 - Bda023391.2 Bda06g00188 7770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00188 744 Gene3D - 552 735 IPR046342 -
Bda06g00188 744 Pfam CBS domain 680 730 IPR000644 -
Bda06g00188 744 CDD ClC_6_like 30 551 - -
Bda06g00188 744 SUPERFAMILY CBS-domain pair 554 731 IPR046342 -
Bda06g00188 744 PRINTS Chloride channel signature 225 244 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda06g00188 744 PRINTS Chloride channel signature 450 470 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda06g00188 744 PRINTS Chloride channel signature 538 552 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda06g00188 744 PRINTS Chloride channel signature 500 519 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda06g00188 744 PRINTS Chloride channel signature 161 180 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda06g00188 744 PRINTS Chloride channel signature 482 498 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda06g00188 744 PRINTS Chloride channel signature 130 147 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda06g00188 744 Gene3D Clc chloride channel 53 551 - -
Bda06g00188 744 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 2 742 - -
Bda06g00188 744 SUPERFAMILY Clc chloride channel 38 553 IPR014743 -
Bda06g00188 744 PRINTS Plant CLC chloride channel signature 35 43 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda06g00188 744 PRINTS Plant CLC chloride channel signature 260 270 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda06g00188 744 PRINTS Plant CLC chloride channel signature 246 254 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda06g00188 744 PRINTS Plant CLC chloride channel signature 278 285 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda06g00188 744 PRINTS Plant CLC chloride channel signature 402 418 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda06g00188 744 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 2 742 - -
Bda06g00188 744 SMART cbs_1 682 733 IPR000644 -
Bda06g00188 744 SMART cbs_1 571 624 IPR000644 -
Bda06g00188 744 ProSiteProfiles CBS domain profile. 678 742 IPR000644 -
Bda06g00188 744 CDD CBS_pair_voltage-gated_CLC_euk_bac 564 731 - -
Bda06g00188 744 Pfam Voltage gated chloride channel 118 532 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00188 Bda08g00422 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00894 Bda-Chr3:7804892 Bda06g00188 Bda-Chr6:2554598 0 dispersed
Bda06g00188 Bda-Chr6:2554598 Bda11g00061 Bda-Chr11:731868 0 dispersed
Bda06g00188 Bda-Chr6:2554598 Bda08g00422 Bda-Chr8:4274229 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00188 K05016 - jre:108988922 1214.13