Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00192 ATGGCTCTAGTCTTGCATTCAGGGAAGACAAATAAAAATAGTTTCAAGACTCTTATTGCTGCAGAGTATGTTGGTGTTCAAGTCGAAATAGCCTCACATTTTGAGATGGGTGTTTCAAATAAAACTCCAGAATTTATTAAGATGAACCCTATTGGGAAGATCCCTGTGCTGGAGACACCTGATGGTCCCATATTTGAGAGCAATGCCATAGCAAGATATGTTTCTCGCTTGAAGACCCATTGCAATCTATTTGCCTCTTCTCCTATAGATTATGGCCACGTTGAACAGTGGATTGATTTTGCATCATTAGAAATTGATGTCCACATTCTGAATTGGTTTAGACTAAGATGGGGTTACGCTCCATATCTTCCTCCTGTCGAGGAAGCTGCTATCTCCAGTTTGAAGAGAGCACTTGGTGCTTTGAATACTCACCTTGCTTCGAACACTTATCTTGTGGGGCACTCTGTTACTCTGGCTGACATCATAATGGCATGCAACTTGTATATGGGTTTTACTCTTTTAATGACCAAGAGCTTCACCTCAGAGTTCCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAACCAAACTTCAAAAAGGTACTTGGTGACGTGAAGCAAACTGAGGCTGTTCCACCAATTCAATCTGCAAAAAAGCCTTCCCAGCCTAAAGAGCCTGCTAAGCCAAAGCATAAGGATGAGCCAAAGAAAGAAGTTAAGAAAGAAGAGAAAAAGGAAAAGCCAAAAGTGGAAGCTGGCGAGGAAGAAGAAGAAGCACCAAAGCCTAAACCTAAAAATCCCCTTGATCTGTTACCTCCCAGTCCGATGATACTGGATGAGTGGAAACGGCTCTACTCTAACACAAAGACCAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGATATGTATGATCCGGAGGGTTATTCTCTTTGGTTCTGTGATTACAAATACAACAATGAGAACACAGTTTCCTTCGTTACCCTGAACAAGGTCAGTGGTTTTCTTCAGCGCATGGATCTTGCCAGGAAATATGCATTTGGGAAGATGCTAGTGATTGGGTCAGAAACACCATTTAAAGTGAAGGGTCTATGGCTTTTCCGTGGGAAAGAAATACCTCAATTCGTGGTTGACGAGTGCTATGACATGGAACTTTACGAATGGACGAAGGTTGATATCTCCGACGAAGCCCAGAAGGAGCGGGTGAGCCAGATGATTGAAGATCACGAGCCTTTCGAGGGAGAATCACTTTTGGATGCAAAATGTTTCAAGTAA 1278 42.64 MALVLHSGKTNKNSFKTLIAAEYVGVQVEIASHFEMGVSNKTPEFIKMNPIGKIPVLETPDGPIFESNAIARYVSRLKTHCNLFASSPIDYGHVEQWIDFASLEIDVHILNWFRLRWGYAPYLPPVEEAAISSLKRALGALNTHLASNTYLVGHSVTLADIIMACNLYMGFTLLMTKSFTSEFPHVERYFWTLVNQPNFKKVLGDVKQTEAVPPIQSAKKPSQPKEPAKPKHKDEPKKEVKKEEKKEKPKVEAGEEEEEAPKPKPKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNNENTVSFVTLNKVSGFLQRMDLARKYAFGKMLVIGSETPFKVKGLWLFRGKEIPQFVVDECYDMELYEWTKVDISDEAQKERVSQMIEDHEPFEGESLLDAKCFK 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2589249 2592256 + Bda023395.1 Bda06g00192 7774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00192 425 PANTHER - 1 425 - -
Bda06g00192 425 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 265 425 IPR036433 GO:0003746|GO:0006414
Bda06g00192 425 SUPERFAMILY GST C-terminal domain-like 82 214 IPR036282 -
Bda06g00192 425 Gene3D Glutaredoxin 1 74 - -
Bda06g00192 425 SFLD Main (cytGST) 3 190 - -
Bda06g00192 425 Gene3D - 81 217 - -
Bda06g00192 425 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 265 425 IPR001662 GO:0003746|GO:0006414
Bda06g00192 425 Pfam Glutathione S-transferase, C-terminal domain 111 197 IPR004046 -
Bda06g00192 425 SFLD Glutathione Transferase (cytosolic) 3 190 IPR040079 -
Bda06g00192 425 CDD GST_C_EF1Bgamma_like 90 210 - -
Bda06g00192 425 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Bda06g00192 425 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 425 IPR044628 GO:0004364
Bda06g00192 425 SMART EF1G_2 264 372 IPR001662 GO:0003746|GO:0006414
Bda06g00192 425 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Bda06g00192 425 SUPERFAMILY Thioredoxin-like 2 78 IPR036249 -
Bda06g00192 425 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Bda06g00192 425 SUPERFAMILY eEF1-gamma domain 265 425 IPR036433 GO:0003746|GO:0006414
Bda06g00192 425 MobiDBLite consensus disorder prediction 224 265 - -
Bda06g00192 425 CDD GST_N_EF1Bgamma 3 77 - -
Bda06g00192 425 MobiDBLite consensus disorder prediction 211 273 - -
Bda06g00192 425 Pfam Elongation factor 1 gamma, conserved domain 264 372 IPR001662 GO:0003746|GO:0006414
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00192 Bda08g00418 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00192 Bda-Chr6:2589249 Bda07g01101 Bda-Chr7:12908099 1.06E-10 dispersed
Bda06g00192 Bda-Chr6:2589249 Bda08g00418 Bda-Chr8:4252353 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00192 K03233 - zju:107412556 675.626